Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:69842231-70172614

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr123150 13 69933245 to 69933255 10 - TSS region transcription start site region 123150
Tssr123151 13 69933258 to 69933267 9 - TSS region transcription start site region 123151
Tssr164706 13 69950343 to 69950344 1 - TSS region transcription start site region 164706
Tssr120288 13 69957986 to 69958001 15 + TSS region transcription start site region 120288
Tssr120289 13 69959829 to 69959836 7 + TSS region transcription start site region 120289
4933416O17Rik 13 69959833 to 69963437 3604 + lincRNA gene RIKEN cDNA 4933416O17 gene
Tssr120290 13 69959869 to 69959870 1 + TSS region transcription start site region 120290
Tssr120291 13 69959874 to 69959881 7 + TSS region transcription start site region 120291
Tssr120292 13 69959884 to 69959903 19 + TSS region transcription start site region 120292
Gm36019 13 69983596 to 69996461 12865 + lncRNA gene predicted gene, 36019
Cpgi5817 13 69991790 to 69992035 245 CpG island CpG island 5817
1700084F23Rik 13 70004050 to 70028348 24298 - lincRNA gene RIKEN cDNA 1700084F23 gene
Gm47655 13 70007231 to 70007614 383 - pseudogene predicted gene, 47655
Cpgi5818 13 70007685 to 70007850 165 CpG island CpG island 5818
Gm3772 13 70021959 to 70119949 97990 + lincRNA gene predicted gene 3772
Tssr123152 13 70028342 to 70028356 14 - TSS region transcription start site region 123152
Tssr120293 13 70028356 to 70028362 6 + TSS region transcription start site region 120293
Gm47656 13 70061558 to 70063922 2364 + unclassified gene predicted gene, 47656
AU017674 13 70149800 to 70205972 56172 + lincRNA gene expressed sequence AU017674
Gm26018 13 70168832 to 70168959 127 + snoRNA gene predicted gene, 26018