MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:69246248-69556397

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm35444	13	69275394 to 69291978	16584	-	lncRNA gene	predicted gene, 35444
Gm4812	13	69345658 to 69346515	857	+	pseudogene	predicted gene 4812
Gm35514	13	69395583 to 69396318	735	+	lincRNA gene	predicted gene, 35514
Gm44375	13	69401248 to 69401397	149	-	miRNA gene	predicted gene, 44375
Cpgi5811	13	69490259 to 69490567	308		CpG island	CpG island 5811
Tent4a	13	69497952 to 69534236	36284	-	protein coding gene	terminal nucleotidyltransferase 4A
Gm48676	13	69514000 to 69514176	176	+	pseudogene	predicted gene, 48676
Cpgi5812	13	69533112 to 69535641	2529		CpG island	CpG island 5812
Tssr123129	13	69534112 to 69534139	27	-	TSS region	transcription start site region 123129
Tssr123130	13	69534141 to 69534156	15	-	TSS region	transcription start site region 123130
Tssr123131	13	69534165 to 69534191	26	-	TSS region	transcription start site region 123131
Tssr123132	13	69534348 to 69534395	47	-	TSS region	transcription start site region 123132
Tssr123133	13	69534421 to 69534467	46	-	TSS region	transcription start site region 123133
A930018O16Rik	13	69534549 to 69535451	902	+	protein coding gene	RIKEN cDNA A930018O16 gene
Tssr4110	13	69534549 to 69534567	18	-	TSS region	transcription start site region 4110
Tssr123134	13	69534577 to 69534616	39	-	TSS region	transcription start site region 123134
A530095I07Rik	13	69543394 to 69544074	680	-	antisense lncRNA gene	RIKEN cDNA A530095I07 gene
Gm40992	13	69548557 to 69553730	5173	-	lncRNA gene	predicted gene, 40992
Gm18882	13	69548956 to 69549762	806	+	pseudogene	predicted gene, 18882