Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:69080658-69611515

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr120272 13 69141198 to 69141207 9 + TSS region transcription start site region 120272
Tssr120273 13 69141219 to 69141234 15 + TSS region transcription start site region 120273
Gm26844 13 69141229 to 69143965 2736 + lincRNA gene predicted gene, 26844
Tssr120274 13 69141235 to 69141258 23 + TSS region transcription start site region 120274
Gm35444 13 69275394 to 69291978 16584 - lncRNA gene predicted gene, 35444
Gm4812 13 69345658 to 69346515 857 + pseudogene predicted gene 4812
Gm35514 13 69395583 to 69396318 735 + lincRNA gene predicted gene, 35514
Gm44375 13 69401248 to 69401397 149 - miRNA gene predicted gene, 44375
Cpgi5811 13 69490259 to 69490567 308 CpG island CpG island 5811
Tent4a 13 69497952 to 69534236 36284 - protein coding gene terminal nucleotidyltransferase 4A
Gm48676 13 69514000 to 69514176 176 + pseudogene predicted gene, 48676
Cpgi5812 13 69533112 to 69535641 2529 CpG island CpG island 5812
Tssr123129 13 69534112 to 69534139 27 - TSS region transcription start site region 123129
Tssr123130 13 69534141 to 69534156 15 - TSS region transcription start site region 123130
Tssr123131 13 69534165 to 69534191 26 - TSS region transcription start site region 123131
Tssr123132 13 69534348 to 69534395 47 - TSS region transcription start site region 123132
Tssr123133 13 69534421 to 69534467 46 - TSS region transcription start site region 123133
Tssr4110 13 69534549 to 69534567 18 - TSS region transcription start site region 4110
A930018O16Rik 13 69534549 to 69535451 902 + protein coding gene RIKEN cDNA A930018O16 gene
Tssr123134 13 69534577 to 69534616 39 - TSS region transcription start site region 123134
A530095I07Rik 13 69543394 to 69544074 680 - antisense lncRNA gene RIKEN cDNA A530095I07 gene
Gm40992 13 69548557 to 69553730 5173 - lncRNA gene predicted gene, 40992
Gm18882 13 69548956 to 69549762 806 + pseudogene predicted gene, 18882
Srd5a1 13 69573449 to 69611442 37993 - protein coding gene steroid 5 alpha-reductase 1
Tssr123135 13 69594970 to 69594977 7 - TSS region transcription start site region 123135
Tssr123136 13 69594995 to 69595006 11 - TSS region transcription start site region 123136
Gm17108 13 69610498 to 69614901 4403 - sense overlapping lncRNA gene predicted gene 17108
Cpgi5813 13 69610660 to 69612602 1942 CpG island CpG island 5813
Tssr123137 13 69611264 to 69611279 15 - TSS region transcription start site region 123137
Tssr123138 13 69611291 to 69611312 21 - TSS region transcription start site region 123138
Tssr123139 13 69611314 to 69611333 19 - TSS region transcription start site region 123139
Tssr123140 13 69611349 to 69611362 13 - TSS region transcription start site region 123140
Tssr123141 13 69611421 to 69611446 25 - TSS region transcription start site region 123141
Tssr123142 13 69611450 to 69611477 27 - TSS region transcription start site region 123142