Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:67843364-68866825

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm10037 13 67831106 to 67844035 12929 + protein coding gene predicted gene 10037
Tssr120265 13 67863324 to 67863328 4 + TSS region transcription start site region 120265
BC048507 13 67863326 to 67863923 597 + protein coding gene cDNA sequence BC048507
Tssr120266 13 67863351 to 67863372 21 + TSS region transcription start site region 120266
Tssr120267 13 67863379 to 67863393 14 + TSS region transcription start site region 120267
Cpgi5807 13 67863381 to 67863790 409 CpG island CpG island 5807
Gm40991 13 67885454 to 67889982 4528 - protein coding gene predicted gene, 40991
Gm7969 13 67949751 to 67954507 4756 + lincRNA gene predicted gene 7969
Gm48419 13 67965483 to 67970239 4756 + lincRNA gene predicted gene, 48419
Gm48423 13 67981215 to 67985971 4756 + lincRNA gene predicted gene, 48423
Gm48424 13 68060456 to 68060608 152 - pseudogene predicted gene, 48424
AA414992 13 68181294 to 68182869 1575 + unclassified gene expressed sequence AA414992
Urml 13 68228432 to 68234731 6299 - lncRNA gene up-regulated in Myc liver
Tssr120268 13 68271033 to 68271037 4 + TSS region transcription start site region 120268
Gm8016 13 68353364 to 68356825 3461 - lincRNA gene predicted gene 8016
Gm46386 13 68444523 to 68447939 3416 - protein coding gene predicted gene, 46386
Gm48429 13 68469680 to 68469832 152 - pseudogene predicted gene, 48429
Gm48436 13 68488998 to 68491389 2391 - lincRNA gene predicted gene, 48436
Mtrr 13 68560780 to 68582149 21369 - protein coding gene 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
Cpgi5808 13 68581677 to 68582860 1183 CpG island CpG island 5808
Tssr123121 13 68582056 to 68582067 11 - TSS region transcription start site region 123121
Tssr123122 13 68582073 to 68582084 11 - TSS region transcription start site region 123122
Tssr123123 13 68582087 to 68582147 60 - TSS region transcription start site region 123123
Tssr120269 13 68582213 to 68582270 57 + TSS region transcription start site region 120269
Fastkd3 13 68582234 to 68592338 10104 + protein coding gene FAST kinase domains 3
Gm48556 13 68590481 to 68594722 4241 - antisense lncRNA gene predicted gene, 48556
Tssr120270 13 68597409 to 68597420 11 + TSS region transcription start site region 120270
Tssr120271 13 68597425 to 68597473 48 + TSS region transcription start site region 120271
1700001L19Rik 13 68597439 to 68614231 16792 + protein coding gene RIKEN cDNA 1700001L19 gene
Gm34903 13 68601553 to 68603793 2240 - lncRNA gene predicted gene, 34903
Cpgi5809 13 68605756 to 68605966 210 CpG island CpG island 5809
Adcy2 13 68620043 to 68999541 379498 - protein coding gene adenylate cyclase 2
Gm34993 13 68657460 to 68665243 7783 + lncRNA gene predicted gene, 34993
D13Mit281 13 68716069 to 68716167 98 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 281
Gm26929 13 68810080 to 68810832 752 + pseudogene predicted gene, 26929
Gm7979 13 68856533 to 68857557 1024 + pseudogene predicted gene 7979