Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:67172478-67773500

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr120251 13 67173156 to 67173204 48 + TSS region transcription start site region 120251
Rsl1 13 67173182 to 67183499 10317 + protein coding gene regulator of sex limited protein 1
Gm49646 13 67187098 to 67187319 221 + pseudogene predicted gene, 49646
Gm9626 13 67187387 to 67188177 790 + pseudogene predicted gene 9626
Tssr120252 13 67194496 to 67194517 21 + TSS region transcription start site region 120252
Zfp455 13 67194506 to 67209298 14792 + protein coding gene zinc finger protein 455
Gm49064 13 67226997 to 67229969 2972 - lincRNA gene predicted gene, 49064
Zfp458 13 67254918 to 67278466 23548 - protein coding gene zinc finger protein 458
Tssr123095 13 67269093 to 67269131 38 - TSS region transcription start site region 123095
F630042J09Rik 13 67278594 to 67283361 4767 + lincRNA gene RIKEN cDNA F630042J09 gene
Zfp457 13 67288137 to 67306412 18275 - protein coding gene zinc finger protein 457
Gm48824 13 67307334 to 67308907 1573 - lincRNA gene predicted gene, 48824
Zfp595 13 67312998 to 67332570 19572 - protein coding gene zinc finger protein 595
Gm28044 13 67317942 to 67360536 42594 - protein coding gene predicted gene, 28044
Tssr123096 13 67332498 to 67332510 12 - TSS region transcription start site region 123096
Tssr123097 13 67332525 to 67332553 28 - TSS region transcription start site region 123097
Zfp953 13 67339309 to 67360572 21263 - protein coding gene zinc finger protein 953
Gm28041 13 67345246 to 67375733 30487 - protein coding gene predicted gene, 28041
Tssr123098 13 67360554 to 67360595 41 - TSS region transcription start site region 123098
Gm17039 13 67360671 to 67365679 5008 + antisense lncRNA gene predicted gene 17039
Zfp456 13 67363584 to 67375763 12179 - protein coding gene zinc finger protein 456
Tssr123099 13 67375729 to 67375757 28 - TSS region transcription start site region 123099
Zfp429 13 67389327 to 67399767 10440 - protein coding gene zinc finger protein 429
Gm48900 13 67390475 to 67408858 18383 + antisense lncRNA gene predicted gene, 48900
Tssr123100 13 67399738 to 67399764 26 - TSS region transcription start site region 123100
Zfp459 13 67405709 to 67421418 15709 - protein coding gene zinc finger protein 459
Cpgi5800 13 67421106 to 67421482 376 CpG island CpG island 5800
Tssr123101 13 67421402 to 67421454 52 - TSS region transcription start site region 123101
Gm33787 13 67421442 to 67424481 3039 + lncRNA gene predicted gene, 33787
Zfp874a 13 67440431 to 67451624 11193 - protein coding gene zinc finger protein 874a
Tssr120253 13 67451247 to 67451259 12 + TSS region transcription start site region 120253
Tssr123102 13 67451591 to 67451638 47 - TSS region transcription start site region 123102
Gm38307 13 67451658 to 67453497 1839 + unclassified gene predicted gene, 38307
Gm7928 13 67460000 to 67460700 700 + pseudogene predicted gene 7928
D13Mit98 13 67468709 to 67468908 199 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 98
Elsgp2 13 67468709 to 67468908 199 QTL elevated serum gp70 2
Zfp874b 13 67471513 to 67484258 12745 - protein coding gene zinc finger protein 874b
Gm48899 13 67472478 to 67473500 1022 + antisense lncRNA gene predicted gene, 48899
Tssr123103 13 67484225 to 67484269 44 - TSS region transcription start site region 123103
Zfp58 13 67490167 to 67500522 10355 - protein coding gene zinc finger protein 58
Gm26965 13 67491152 to 67526151 34999 - protein coding gene predicted gene, 26965
Tssr123104 13 67495645 to 67495649 4 - TSS region transcription start site region 123104
Tssr120254 13 67499481 to 67499503 22 + TSS region transcription start site region 120254
Cpgi5801 13 67500067 to 67500522 455 CpG island CpG island 5801
Tssr123105 13 67500451 to 67500512 61 - TSS region transcription start site region 123105
Gm18261 13 67505524 to 67506446 922 - pseudogene predicted gene, 18261
Zfp87 13 67515781 to 67526177 10396 - protein coding gene zinc finger protein 87
Cpgi5802 13 67525866 to 67526348 482 CpG island CpG island 5802
Tssr123106 13 67526136 to 67526179 43 - TSS region transcription start site region 123106
Zfp748 13 67538641 to 67553152 14511 - protein coding gene zinc finger protein 748
Cpgi5803 13 67552816 to 67553350 534 CpG island CpG island 5803
9430065F17Rik 13 67553035 to 67564010 10975 + antisense lncRNA gene RIKEN cDNA 9430065F17 gene
Tssr123107 13 67553099 to 67553176 77 - TSS region transcription start site region 123107
Tssr120255 13 67586370 to 67586389 19 + TSS region transcription start site region 120255
Zfp729b 13 67589439 to 67609707 20268 - protein coding gene zinc finger protein 729b
Gm49345 13 67592159 to 67637769 45610 - protein coding gene predicted gene, 49345
Tssr123108 13 67609634 to 67609664 30 - TSS region transcription start site region 123108
Tssr123109 13 67609667 to 67609695 28 - TSS region transcription start site region 123109
Zfp729a 13 67616309 to 67638063 21754 - protein coding gene zinc finger protein 729a
Cpgi5804 13 67637427 to 67637682 255 CpG island CpG island 5804
Tssr123110 13 67637730 to 67637737 7 - TSS region transcription start site region 123110
Tssr123111 13 67637740 to 67637749 9 - TSS region transcription start site region 123111
Tssr123112 13 67637776 to 67637801 25 - TSS region transcription start site region 123112
Gm46439 13 67642545 to 67646495 3950 + pseudogene predicted gene, 46439
Gm48095 13 67658669 to 67667943 9274 + antisense lncRNA gene predicted gene, 48095
Tssr120256 13 67660370 to 67660375 5 + TSS region transcription start site region 120256
Gm26587 13 67660457 to 67661445 988 + pseudogene predicted gene, 26587
Zfp738 13 67667441 to 67683570 16129 - protein coding gene zinc finger protein 738
Tssr123113 13 67683475 to 67683562 87 - TSS region transcription start site region 123113
Gm26875 13 67699082 to 67700031 949 + pseudogene predicted gene, 26875
Zfp65 13 67705309 to 67729173 23864 - protein coding gene zinc finger protein 65
Tssr123114 13 67724264 to 67724340 76 - TSS region transcription start site region 123114
Gm48894 13 67725060 to 67725438 378 - pseudogene predicted gene, 48894
Tssr120257 13 67728736 to 67728766 30 + TSS region transcription start site region 120257
Tssr123115 13 67729109 to 67729145 36 - TSS region transcription start site region 123115
Tssr120258 13 67729231 to 67729244 13 + TSS region transcription start site region 120258
Zfp85os 13 67729262 to 67756838 27576 + antisense lncRNA gene zinc finger protein 85, opposite strand
Tssr120259 13 67744199 to 67744208 9 + TSS region transcription start site region 120259
Tssr120260 13 67744220 to 67744225 5 + TSS region transcription start site region 120260
Zfp85 13 67747800 to 67755134 7334 - protein coding gene zinc finger protein 85
Tssr123116 13 67755132 to 67755169 37 - TSS region transcription start site region 123116
Tssr123117 13 67755192 to 67755211 19 - TSS region transcription start site region 123117
Gm9894 13 67764247 to 67765065 818 - pseudogene predicted gene 9894