Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:6619636-8319736

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pfkp 13 6579874 to 6648792 68918 - protein coding gene phosphofructokinase, platelet
Cpgi5255 13 6621885 to 6622159 274 CpG island CpG island 5255
Gm35730 13 6631534 to 6648563 17029 + lncRNA gene predicted gene, 35730
Tssr121331 13 6636653 to 6636686 33 - TSS region transcription start site region 121331
Tssr121332 13 6640662 to 6640679 17 - TSS region transcription start site region 121332
Tssr121333 13 6640789 to 6640809 20 - TSS region transcription start site region 121333
Cpgi5256 13 6647082 to 6647460 378 CpG island CpG island 5256
Cpgi5257 13 6648444 to 6649123 679 CpG island CpG island 5257
Tssr121334 13 6648696 to 6648703 7 - TSS region transcription start site region 121334
Tssr121335 13 6648717 to 6648772 55 - TSS region transcription start site region 121335
Tssr121336 13 6648781 to 6648789 8 - TSS region transcription start site region 121336
Gm10029 13 6662565 to 6662894 329 - pseudogene predicted gene 10029
Gm48238 13 6673139 to 6673408 269 + pseudogene predicted gene, 48238
Tssr118290 13 6888752 to 6888760 8 + TSS region transcription start site region 118290
2900024D18Rik 13 6925283 to 6925851 568 - unclassified gene RIKEN cDNA 2900024D18 gene
D13Mit301 13 6969203 to 6969344 141 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 301
Gm40662 13 6995654 to 7076197 80543 - lincRNA gene predicted gene, 40662
Gm22689 13 7120394 to 7120503 109 - miRNA gene predicted gene, 22689
Gm35925 13 7137850 to 7161134 23284 - lncRNA gene predicted gene, 35925
Gm40663 13 7161176 to 7175750 14574 - lincRNA gene predicted gene, 40663
Tssr121337 13 7175666 to 7175671 5 - TSS region transcription start site region 121337
Gm8725 13 7307802 to 7309134 1332 + pseudogene predicted gene 8725
Gm6437 13 7387147 to 7388238 1091 + pseudogene predicted gene 6437
Gm36074 13 7446509 to 7465343 18834 + lincRNA gene predicted gene, 36074
Tssr118291 13 7446519 to 7446539 20 + TSS region transcription start site region 118291
D13Mit300 13 7469636 to 7469736 100 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 300
Gm36136 13 7507318 to 7510231 2913 + lncRNA gene predicted gene, 36136
Gm48251 13 7633044 to 7633191 147 + pseudogene predicted gene, 48251
Gm48252 13 7753170 to 7753278 108 - pseudogene predicted gene, 48252
Gm48253 13 7803436 to 7804714 1278 - unclassified gene predicted gene, 48253
Gm9742 13 8029503 to 8031353 1850 - pseudogene predicted gene 9742
Cpgi5258 13 8031444 to 8031618 174 CpG island CpG island 5258
Gm5191 13 8128133 to 8129368 1235 + pseudogene predicted gene 5191
Gm48257 13 8199247 to 8200494 1247 - lincRNA gene predicted gene, 48257
Tssr118292 13 8202860 to 8202871 11 + TSS region transcription start site region 118292
Adarb2 13 8202866 to 8768747 565881 + protein coding gene adenosine deaminase, RNA-specific, B2
Tssr118293 13 8202885 to 8202918 33 + TSS region transcription start site region 118293
Tssr118294 13 8202922 to 8202935 13 + TSS region transcription start site region 118294
Tssr118295 13 8243744 to 8243747 3 + TSS region transcription start site region 118295
Gm48259 13 8278604 to 8279289 685 + unclassified gene predicted gene, 48259
Tssr118296 13 8279127 to 8279141 14 + TSS region transcription start site region 118296
Gm48261 13 8282248 to 8286103 3855 + unclassified gene predicted gene, 48261
Gm10357 13 8289850 to 8290113 263 - pseudogene predicted gene 10357
Tssr118297 13 8292966 to 8292979 13 + TSS region transcription start site region 118297
Gm48260 13 8295315 to 8299143 3828 - pseudogene predicted gene, 48260
Tssr118298 13 8301495 to 8301500 5 + TSS region transcription start site region 118298