MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:6566534-6713563

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pitrm1	13	6548122 to 6580158	32036	+	protein coding gene	pitrilysin metallepetidase 1
Pfkp	13	6579874 to 6648792	68918	-	protein coding gene	phosphofructokinase, platelet
Tssr121327	13	6595903 to 6595907	4	-	TSS region	transcription start site region 121327
Tssr121328	13	6598378 to 6598382	4	-	TSS region	transcription start site region 121328
Tssr121329	13	6604379 to 6604395	16	-	TSS region	transcription start site region 121329
Tssr118289	13	6604979 to 6605008	29	+	TSS region	transcription start site region 118289
Tssr121330	13	6605028 to 6605063	35	-	TSS region	transcription start site region 121330
Cpgi5255	13	6621885 to 6622159	274		CpG island	CpG island 5255
Gm35730	13	6631534 to 6648563	17029	+	lncRNA gene	predicted gene, 35730
Tssr121331	13	6636653 to 6636686	33	-	TSS region	transcription start site region 121331
Tssr121332	13	6640662 to 6640679	17	-	TSS region	transcription start site region 121332
Tssr121333	13	6640789 to 6640809	20	-	TSS region	transcription start site region 121333
Cpgi5256	13	6647082 to 6647460	378		CpG island	CpG island 5256
Cpgi5257	13	6648444 to 6649123	679		CpG island	CpG island 5257
Tssr121334	13	6648696 to 6648703	7	-	TSS region	transcription start site region 121334
Tssr121335	13	6648717 to 6648772	55	-	TSS region	transcription start site region 121335
Tssr121336	13	6648781 to 6648789	8	-	TSS region	transcription start site region 121336
Gm10029	13	6662565 to 6662894	329	-	pseudogene	predicted gene 10029
Gm48238	13	6673139 to 6673408	269	+	pseudogene	predicted gene, 48238