MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:64407412-64508788

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr123060	13	64408850 to 64408853	3	-	TSS region	transcription start site region 123060
Tssr120215	13	64410777 to 64410781	4	+	TSS region	transcription start site region 120215
Tssr123061	13	64413379 to 64413409	30	-	TSS region	transcription start site region 123061
Tssr123062	13	64421657 to 64421674	17	-	TSS region	transcription start site region 123062
Tssr120216	13	64422431 to 64422440	9	+	TSS region	transcription start site region 120216
1700015C15Rik	13	64427956 to 64432436	4480	-	antisense lncRNA gene	RIKEN cDNA 1700015C15 gene
Cpgi5781	13	64432222 to 64433163	941		CpG island	CpG island 5781
Cdk20	13	64432319 to 64439722	7403	+	protein coding gene	cyclin-dependent kinase 20
Tssr120217	13	64432347 to 64432419	72	+	TSS region	transcription start site region 120217
Tssr123063	13	64432462 to 64432495	33	-	TSS region	transcription start site region 123063
Tssr120218	13	64432479 to 64432557	78	+	TSS region	transcription start site region 120218
Tssr120219	13	64432595 to 64432609	14	+	TSS region	transcription start site region 120219
Tssr120220	13	64432763 to 64432779	16	+	TSS region	transcription start site region 120220
Gm31218	13	64449477 to 64508402	58925	+	lincRNA gene	predicted gene, 31218
Gm7712	13	64457412 to 64458788	1376	-	pseudogene	predicted gene 7712
Cpgi5782	13	64457689 to 64457872	183		CpG island	CpG island 5782
Cpgi5783	13	64458838 to 64459021	183		CpG island	CpG island 5783
Fam240b	13	64481246 to 64497792	16546	-	protein coding gene	family with sequence similarity 240 member B