Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:64399539-64960275

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr123060 13 64408850 to 64408853 3 - TSS region transcription start site region 123060
Tssr120215 13 64410777 to 64410781 4 + TSS region transcription start site region 120215
Tssr123061 13 64413379 to 64413409 30 - TSS region transcription start site region 123061
Tssr123062 13 64421657 to 64421674 17 - TSS region transcription start site region 123062
Tssr120216 13 64422431 to 64422440 9 + TSS region transcription start site region 120216
1700015C15Rik 13 64427956 to 64432436 4480 - antisense lncRNA gene RIKEN cDNA 1700015C15 gene
Cpgi5781 13 64432222 to 64433163 941 CpG island CpG island 5781
Cdk20 13 64432319 to 64439722 7403 + protein coding gene cyclin-dependent kinase 20
Tssr120217 13 64432347 to 64432419 72 + TSS region transcription start site region 120217
Tssr123063 13 64432462 to 64432495 33 - TSS region transcription start site region 123063
Tssr120218 13 64432479 to 64432557 78 + TSS region transcription start site region 120218
Tssr120219 13 64432595 to 64432609 14 + TSS region transcription start site region 120219
Tssr120220 13 64432763 to 64432779 16 + TSS region transcription start site region 120220
Gm31218 13 64449477 to 64508402 58925 + lincRNA gene predicted gene, 31218
Gm7712 13 64457412 to 64458788 1376 - pseudogene predicted gene 7712
Cpgi5782 13 64457689 to 64457872 183 CpG island CpG island 5782
Cpgi5783 13 64458838 to 64459021 183 CpG island CpG island 5783
Fam240b 13 64481246 to 64497792 16546 - protein coding gene family with sequence similarity 240 member B
Gm4810 13 64509490 to 64511096 1606 + pseudogene predicted gene 4810
Tssr120221 13 64510264 to 64510277 13 + TSS region transcription start site region 120221
Gm47190 13 64515443 to 64515854 411 - pseudogene predicted gene, 47190
Gm47191 13 64611860 to 64619498 7638 + pseudogene predicted gene, 47191
Gm47193 13 64619550 to 64625002 5452 + lincRNA gene predicted gene, 47193
Gm5791 13 64624272 to 64624760 488 - pseudogene predicted gene 5791
Tssr123064 13 64624782 to 64624807 25 - TSS region transcription start site region 123064
Gm4935 13 64673863 to 64675060 1197 + pseudogene predicted gene 4935
Gm47194 13 64674539 to 64685275 10736 - lincRNA gene predicted gene, 47194
Tssr120222 13 64687632 to 64687636 4 + TSS region transcription start site region 120222
Gm7065 13 64703158 to 64703631 473 + pseudogene predicted gene 7065
Cntnap3 13 64737591 to 64904029 166438 - protein coding gene contactin associated protein-like 3
Cpgi5784 13 64903910 to 64904197 287 CpG island CpG island 5784
Tssr123065 13 64903949 to 64903995 46 - TSS region transcription start site region 123065
Eif1-ps2 13 64913972 to 64914310 338 + pseudogene eukaryotic translation initiation factor 1, pseudogene 2
Spata31 13 64917406 to 64923194 5788 + protein coding gene spermatogenesis associated 31
Tssr120223 13 64917431 to 64917466 35 + TSS region transcription start site region 120223
D13Dcr12 13 64919565 to 64919660 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 12
Gm4811 13 64927942 to 64929161 1219 - pseudogene predicted gene 4811