Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:64397412-64518788

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr123060 13 64408850 to 64408853 3 - TSS region transcription start site region 123060
Tssr120215 13 64410777 to 64410781 4 + TSS region transcription start site region 120215
Tssr123061 13 64413379 to 64413409 30 - TSS region transcription start site region 123061
Tssr123062 13 64421657 to 64421674 17 - TSS region transcription start site region 123062
Tssr120216 13 64422431 to 64422440 9 + TSS region transcription start site region 120216
1700015C15Rik 13 64427956 to 64432436 4480 - antisense lncRNA gene RIKEN cDNA 1700015C15 gene
Cpgi5781 13 64432222 to 64433163 941 CpG island CpG island 5781
Cdk20 13 64432319 to 64439722 7403 + protein coding gene cyclin-dependent kinase 20
Tssr120217 13 64432347 to 64432419 72 + TSS region transcription start site region 120217
Tssr123063 13 64432462 to 64432495 33 - TSS region transcription start site region 123063
Tssr120218 13 64432479 to 64432557 78 + TSS region transcription start site region 120218
Tssr120219 13 64432595 to 64432609 14 + TSS region transcription start site region 120219
Tssr120220 13 64432763 to 64432779 16 + TSS region transcription start site region 120220
Gm31218 13 64449477 to 64508402 58925 + lincRNA gene predicted gene, 31218
Gm7712 13 64457412 to 64458788 1376 - pseudogene predicted gene 7712
Cpgi5782 13 64457689 to 64457872 183 CpG island CpG island 5782
Cpgi5783 13 64458838 to 64459021 183 CpG island CpG island 5783
Fam240b 13 64481246 to 64497792 16546 - protein coding gene family with sequence similarity 240 member B
Gm4810 13 64509490 to 64511096 1606 + pseudogene predicted gene 4810
Tssr120221 13 64510264 to 64510277 13 + TSS region transcription start site region 120221
Gm47190 13 64515443 to 64515854 411 - pseudogene predicted gene, 47190