Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:64273936-64454054

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdc14b 13 64192545 to 64274988 82443 - protein coding gene CDC14 cell division cycle 14B
Cpgi5778 13 64273928 to 64275701 1773 CpG island CpG island 5778
Tssr123026 13 64274922 to 64274947 25 - TSS region transcription start site region 123026
Tssr123027 13 64274950 to 64274959 9 - TSS region transcription start site region 123027
Tssr123028 13 64274962 to 64275004 42 - TSS region transcription start site region 123028
Tssr123029 13 64275031 to 64275042 11 - TSS region transcription start site region 123029
Tssr120205 13 64275120 to 64275131 11 + TSS region transcription start site region 120205
Tssr120206 13 64276258 to 64276262 4 + TSS region transcription start site region 120206
Tssr123030 13 64289156 to 64289158 2 - TSS region transcription start site region 123030
Gm47003 13 64291077 to 64298039 6962 + antisense lncRNA gene predicted gene, 47003
Prxl2c 13 64291836 to 64312710 20874 - protein coding gene peroxiredoxin like 2C
Gm25654 13 64296437 to 64296524 87 - snRNA gene predicted gene, 25654
D13Dcr11 13 64299118 to 64299213 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 11
Tssr123031 13 64307064 to 64307068 4 - TSS region transcription start site region 123031
Cpgi5779 13 64312120 to 64312964 844 CpG island CpG island 5779
Tssr123032 13 64312568 to 64312623 55 - TSS region transcription start site region 123032
Tssr123033 13 64312628 to 64312654 26 - TSS region transcription start site region 123033
Tssr123034 13 64312676 to 64312746 70 - TSS region transcription start site region 123034
Gm31128 13 64316550 to 64343787 27237 - lncRNA gene predicted gene, 31128
Tssr123035 13 64320386 to 64320391 5 - TSS region transcription start site region 123035
Gm47123 13 64361052 to 64363022 1970 + antisense lncRNA gene predicted gene, 47123
Gm49230 13 64361343 to 64361737 394 - pseudogene predicted gene, 49230
Ctsl 13 64361890 to 64370748 8858 - protein coding gene cathepsin L
Tssr123036 13 64363000 to 64363003 3 - TSS region transcription start site region 123036
Tssr123037 13 64363688 to 64363699 11 - TSS region transcription start site region 123037
Tssr123038 13 64363748 to 64363759 11 - TSS region transcription start site region 123038
Tssr120207 13 64363795 to 64363805 10 + TSS region transcription start site region 120207
Tssr123039 13 64363851 to 64363862 11 - TSS region transcription start site region 123039
Tssr123040 13 64363936 to 64364054 118 - TSS region transcription start site region 123040
Tssr123041 13 64364056 to 64364138 82 - TSS region transcription start site region 123041
Tssr123042 13 64364141 to 64364195 54 - TSS region transcription start site region 123042
Tssr120208 13 64364163 to 64364175 12 + TSS region transcription start site region 120208
Tssr123043 13 64365233 to 64365240 7 - TSS region transcription start site region 123043
Tssr123044 13 64365253 to 64365331 78 - TSS region transcription start site region 123044
Tssr120209 13 64365281 to 64365295 14 + TSS region transcription start site region 120209
Tssr123045 13 64366162 to 64366188 26 - TSS region transcription start site region 123045
Tssr123046 13 64366508 to 64366596 88 - TSS region transcription start site region 123046
Tssr123047 13 64366600 to 64366652 52 - TSS region transcription start site region 123047
Tssr123048 13 64366897 to 64366937 40 - TSS region transcription start site region 123048
Tssr123049 13 64366939 to 64367095 156 - TSS region transcription start site region 123049
Tssr120210 13 64367026 to 64367073 47 + TSS region transcription start site region 120210
Tssr120211 13 64367882 to 64367899 17 + TSS region transcription start site region 120211
Tssr123050 13 64367882 to 64367951 69 - TSS region transcription start site region 123050
Tssr120212 13 64367966 to 64367982 16 + TSS region transcription start site region 120212
Tssr123051 13 64367972 to 64368021 49 - TSS region transcription start site region 123051
Tssr120213 13 64368126 to 64368208 82 + TSS region transcription start site region 120213
Tssr123052 13 64368149 to 64368227 78 - TSS region transcription start site region 123052
Tssr123053 13 64368233 to 64368244 11 - TSS region transcription start site region 123053
Tssr123054 13 64368756 to 64368768 12 - TSS region transcription start site region 123054
Tssr123055 13 64368819 to 64368831 12 - TSS region transcription start site region 123055
Tssr123056 13 64369016 to 64369029 13 - TSS region transcription start site region 123056
Tssr123057 13 64369050 to 64369179 129 - TSS region transcription start site region 123057
Cpgi5780 13 64369709 to 64370562 853 CpG island CpG island 5780
Tssr123058 13 64370298 to 64370315 17 - TSS region transcription start site region 123058
Tssr123059 13 64370345 to 64370362 17 - TSS region transcription start site region 123059
Tssr120214 13 64370442 to 64370464 22 + TSS region transcription start site region 120214
Tssr123060 13 64408850 to 64408853 3 - TSS region transcription start site region 123060
Tssr120215 13 64410777 to 64410781 4 + TSS region transcription start site region 120215
Tssr123061 13 64413379 to 64413409 30 - TSS region transcription start site region 123061
Tssr123062 13 64421657 to 64421674 17 - TSS region transcription start site region 123062
Tssr120216 13 64422431 to 64422440 9 + TSS region transcription start site region 120216
1700015C15Rik 13 64427956 to 64432436 4480 - antisense lncRNA gene RIKEN cDNA 1700015C15 gene
Cpgi5781 13 64432222 to 64433163 941 CpG island CpG island 5781
Cdk20 13 64432319 to 64439722 7403 + protein coding gene cyclin-dependent kinase 20
Tssr120217 13 64432347 to 64432419 72 + TSS region transcription start site region 120217
Tssr123063 13 64432462 to 64432495 33 - TSS region transcription start site region 123063
Tssr120218 13 64432479 to 64432557 78 + TSS region transcription start site region 120218
Tssr120219 13 64432595 to 64432609 14 + TSS region transcription start site region 120219
Tssr120220 13 64432763 to 64432779 16 + TSS region transcription start site region 120220
Gm31218 13 64449477 to 64508402 58925 + lincRNA gene predicted gene, 31218