Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:63296587-63566617

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aopep 13 62964893 to 63326096 361203 + protein coding gene aminopeptidase O
Gm16907 13 63289601 to 63297147 7546 - lincRNA gene predicted gene, 16907
D13Mit283 13 63297367 to 63297479 112 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 283
Mir23b 13 63300484 to 63300557 73 + miRNA gene microRNA 23b
Mirc22 13 63300484 to 63301275 791 complex/cluster/region microRNA cluster 22, including Mir23b through Mir24-1
Mir27b 13 63300712 to 63300784 72 + miRNA gene microRNA 27b
Mir3074-1 13 63301199 to 63301283 84 - miRNA gene microRNA 3074-1
Mir24-1 13 63301208 to 63301275 67 + miRNA gene microRNA 24-1
Tssr120193 13 63301270 to 63301276 6 + TSS region transcription start site region 120193
Fancc 13 63304705 to 63497294 192589 - protein coding gene Fanconi anemia, complementation group C
Tssr122971 13 63323518 to 63323525 7 - TSS region transcription start site region 122971
Tssr122972 13 63325017 to 63325021 4 - TSS region transcription start site region 122972
Gm16133 13 63329556 to 63339961 10405 + antisense lncRNA gene predicted gene 16133
Gm16132 13 63376761 to 63381045 4284 - sense intronic lncRNA gene predicted gene 16132
Tssr122973 13 63398252 to 63398261 9 - TSS region transcription start site region 122973
Tssr122974 13 63398281 to 63398299 18 - TSS region transcription start site region 122974
Gm47588 13 63410918 to 63414767 3849 - unclassified gene predicted gene, 47588
Cpgi5764 13 63430898 to 63431978 1080 CpG island CpG island 5764
Tssr122975 13 63431587 to 63431617 30 - TSS region transcription start site region 122975
Tssr122976 13 63431698 to 63431733 35 - TSS region transcription start site region 122976
Tssr122977 13 63431737 to 63431755 18 - TSS region transcription start site region 122977
Gm16134 13 63446930 to 63447265 335 - pseudogene predicted gene 16134
Cpgi5765 13 63497076 to 63497304 228 CpG island CpG island 5765
Ptch1 13 63508328 to 63573598 65270 - protein coding gene patched 1
D13Mit123 13 63527597 to 63527742 145 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 123
Tssr122978 13 63533584 to 63533605 21 - TSS region transcription start site region 122978
Tssr122979 13 63539338 to 63539352 14 - TSS region transcription start site region 122979
Tssr122980 13 63540323 to 63540329 6 - TSS region transcription start site region 122980
Tssr122981 13 63553321 to 63553325 4 - TSS region transcription start site region 122981
Tssr122982 13 63563067 to 63563084 17 - TSS region transcription start site region 122982
Cpgi5766 13 63563070 to 63566672 3602 CpG island CpG island 5766
Tssr122983 13 63563087 to 63563131 44 - TSS region transcription start site region 122983
Tssr120194 13 63563397 to 63563402 5 + TSS region transcription start site region 120194
Tssr122984 13 63564730 to 63564772 42 - TSS region transcription start site region 122984
Tssr122985 13 63566157 to 63566182 25 - TSS region transcription start site region 122985
Tssr122986 13 63566187 to 63566224 37 - TSS region transcription start site region 122986
Tssr122987 13 63566249 to 63566278 29 - TSS region transcription start site region 122987