Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:60661887-60906364

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dapk1 13 60601947 to 60763191 161244 + protein coding gene death associated protein kinase 1
Tssr122911 13 60672853 to 60672879 26 - TSS region transcription start site region 122911
Tssr120128 13 60672991 to 60673004 13 + TSS region transcription start site region 120128
Gm35540 13 60685966 to 60688276 2310 + lncRNA gene predicted gene, 35540
Tssr120129 13 60729380 to 60729385 5 + TSS region transcription start site region 120129
Tssr120130 13 60733825 to 60733842 17 + TSS region transcription start site region 120130
D13Mit209 13 60737260 to 60737389 129 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 209
Tssr120131 13 60738151 to 60738162 11 + TSS region transcription start site region 120131
Tssr120132 13 60739932 to 60739946 14 + TSS region transcription start site region 120132
Tssr120133 13 60751812 to 60751828 16 + TSS region transcription start site region 120133
Cpgi5754 13 60761044 to 60761217 173 CpG island CpG island 5754
Tssr120134 13 60761927 to 60761942 15 + TSS region transcription start site region 120134
Tssr120135 13 60762467 to 60762482 15 + TSS region transcription start site region 120135
Tssr120136 13 60762512 to 60762527 15 + TSS region transcription start site region 120136
Tssr120137 13 60762547 to 60762587 40 + TSS region transcription start site region 120137
Gm10312 13 60771675 to 60772163 488 + pseudogene predicted gene 10312
BC051665 13 60781887 to 60786364 4477 - protein coding gene cDNA sequence BC051665
Ctsll3 13 60798250 to 60802844 4594 - protein coding gene cathepsin L-like 3
4930486L24Rik 13 60842612 to 60864416 21804 - protein coding gene RIKEN cDNA 4930486L24 gene
Gm49392 13 60842621 to 60896894 54273 - protein coding gene predicted gene, 49392
Tssr122912 13 60843017 to 60843032 15 - TSS region transcription start site region 122912
Tssr122913 13 60848857 to 60848869 12 - TSS region transcription start site region 122913
Gm49393 13 60853230 to 60935590 82360 - protein coding gene predicted gene, 49393
Tssr122914 13 60864373 to 60864437 64 - TSS region transcription start site region 122914
Ctla2b 13 60895350 to 60897447 2097 - protein coding gene cytotoxic T lymphocyte-associated protein 2 beta
Gm49391 13 60895350 to 60936571 41221 - protein coding gene predicted gene, 49391
Tssr4098 13 60895606 to 60895646 40 - TSS region transcription start site region 4098
Tssr122915 13 60897397 to 60897414 17 - TSS region transcription start site region 122915
Tssr122916 13 60897425 to 60897430 5 - TSS region transcription start site region 122916
Tssr122917 13 60897439 to 60897455 16 - TSS region transcription start site region 122917
Tpbpb 13 60901295 to 60904847 3552 - protein coding gene trophoblast specific protein beta
Tssr122918 13 60901353 to 60901362 9 - TSS region transcription start site region 122918
Tssr120138 13 60902101 to 60902106 5 + TSS region transcription start site region 120138
Tssr120139 13 60902127 to 60902142 15 + TSS region transcription start site region 120139
Tssr120140 13 60902526 to 60902542 16 + TSS region transcription start site region 120140
Tssr122919 13 60902588 to 60902602 14 - TSS region transcription start site region 122919
Tssr122920 13 60904839 to 60904851 12 - TSS region transcription start site region 122920
Tssr122921 13 60905120 to 60905133 13 - TSS region transcription start site region 122921