Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:60338586-60606298

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Jpk1 13 60362758 to 60362872 114 DNA segment DNA segment, Chr 13, Japan, Kominami 1
Gm35333 13 60422756 to 60434731 11975 - lincRNA gene predicted gene, 35333
Gm48500 13 60463586 to 60481298 17712 - lincRNA gene predicted gene, 48500
D13Mit43 13 60466446 to 60466577 131 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 43
Tssr122907 13 60480362 to 60480371 9 - TSS region transcription start site region 122907
A530001N23Rik 13 60483504 to 60488808 5304 - lincRNA gene RIKEN cDNA A530001N23 gene
Tssr122908 13 60508785 to 60508820 35 - TSS region transcription start site region 122908
Gm25000 13 60529296 to 60529409 113 - miRNA gene predicted gene, 25000
Gm40974 13 60601110 to 60602485 1375 - lncRNA gene predicted gene, 40974
Cpgi5753 13 60601553 to 60602819 1266 CpG island CpG island 5753
Tssr120113 13 60601695 to 60601704 9 + TSS region transcription start site region 120113
Tssr120114 13 60601743 to 60601754 11 + TSS region transcription start site region 120114
Tssr120115 13 60601774 to 60601788 14 + TSS region transcription start site region 120115
Tssr120116 13 60601921 to 60602039 118 + TSS region transcription start site region 120116
Dapk1 13 60601947 to 60763191 161244 + protein coding gene death associated protein kinase 1
Tssr120117 13 60602182 to 60602231 49 + TSS region transcription start site region 120117
Tssr4096 13 60602555 to 60602576 21 - TSS region transcription start site region 4096
Tssr122909 13 60602584 to 60602596 12 - TSS region transcription start site region 122909
Tssr120118 13 60603589 to 60603600 11 + TSS region transcription start site region 120118