Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:60167758-60557872

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gas1 13 60174405 to 60177365 2960 - protein coding gene growth arrest specific 1
Tssr122895 13 60174869 to 60174888 19 - TSS region transcription start site region 122895
Tssr122896 13 60174987 to 60174997 10 - TSS region transcription start site region 122896
Tssr122897 13 60175024 to 60175038 14 - TSS region transcription start site region 122897
Tssr122898 13 60175206 to 60175224 18 - TSS region transcription start site region 122898
Cpgi5749 13 60175519 to 60177839 2320 CpG island CpG island 5749
Tssr122899 13 60176049 to 60176053 4 - TSS region transcription start site region 122899
Tssr122900 13 60176547 to 60176564 17 - TSS region transcription start site region 122900
Gm48488 13 60176682 to 60182862 6180 + lincRNA gene predicted gene, 48488
Tssr122901 13 60177064 to 60177083 19 - TSS region transcription start site region 122901
Tssr122902 13 60177118 to 60177148 30 - TSS region transcription start site region 122902
Tssr122903 13 60177166 to 60177202 36 - TSS region transcription start site region 122903
Tssr122904 13 60177357 to 60177373 16 - TSS region transcription start site region 122904
Tssr122905 13 60177392 to 60177399 7 - TSS region transcription start site region 122905
Tssr122906 13 60177498 to 60177574 76 - TSS region transcription start site region 122906
Cpgi5750 13 60179333 to 60179828 495 CpG island CpG island 5750
Gm5084 13 60205471 to 60216018 10547 + lincRNA gene predicted gene 5084
Cpgi5751 13 60205925 to 60206142 217 CpG island CpG island 5751
Cpgi5752 13 60248535 to 60248708 173 CpG island CpG island 5752
Tssr120112 13 60248564 to 60248567 3 + TSS region transcription start site region 120112
Gm19249 13 60248566 to 60249006 440 + pseudogene predicted gene, 19249
Gm24999 13 60293672 to 60293772 100 + miRNA gene predicted gene, 24999
Gm10779 13 60331449 to 60333751 2302 + protein coding gene predicted gene 10779
D13Jpk1 13 60362758 to 60362872 114 DNA segment DNA segment, Chr 13, Japan, Kominami 1
Gm35333 13 60422756 to 60434731 11975 - lincRNA gene predicted gene, 35333
Gm48500 13 60463586 to 60481298 17712 - lincRNA gene predicted gene, 48500
D13Mit43 13 60466446 to 60466577 131 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 43
Tssr122907 13 60480362 to 60480371 9 - TSS region transcription start site region 122907
A530001N23Rik 13 60483504 to 60488808 5304 - lincRNA gene RIKEN cDNA A530001N23 gene
Tssr122908 13 60508785 to 60508820 35 - TSS region transcription start site region 122908
Gm25000 13 60529296 to 60529409 113 - miRNA gene predicted gene, 25000