MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:59851369-60151510

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm48384	13	59873642 to 59874964	1322	+	lincRNA gene	predicted gene, 48384
Tssr120108	13	59876045 to 59876056	11	+	TSS region	transcription start site region 120108
Gm19866	13	59901233 to 59915822	14589	-	lincRNA gene	predicted gene, 19866
Gm48390	13	59919438 to 59920340	902	+	pseudogene	predicted gene, 48390
D13Mit141	13	59977031 to 59977133	102		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 141
Gm35143	13	59990668 to 59998541	7873	+	lncRNA gene	predicted gene, 35143
D13Mit157	13	60001369 to 60001510	141		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 157
C77681	13	60015566 to 60016152	586		unclassified gene	expressed sequence C77681
Tssr120109	13	60029622 to 60029629	7	+	TSS region	transcription start site region 120109
Tssr120110	13	60029673 to 60029693	20	+	TSS region	transcription start site region 120110
Tssr120111	13	60029704 to 60029709	5	+	TSS region	transcription start site region 120111
A530065N20Rik	13	60029711 to 60116669	86958	+	lincRNA gene	RIKEN cDNA A530046M15 gene
Gm35193	13	60041125 to 60044998	3873	-	lncRNA gene	predicted gene, 35193
Gm48396	13	60053684 to 60057625	3941	-	lincRNA gene	predicted gene, 48396
Gm48397	13	60068641 to 60074017	5376	+	lincRNA gene	predicted gene, 48397
Gm46420	13	60114526 to 60126416	11890	-	lncRNA gene	predicted gene, 46420
Cpgi5746	13	60126269 to 60126662	393		CpG island	CpG island 5746
Cpgi5747	13	60131873 to 60132032	159		CpG island	CpG island 5747
Cpgi5748	13	60147388 to 60147574	186		CpG island	CpG island 5748