Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:59580153-59700172

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sysbp2 13 20293442 to 59673791 39380349 QTL systolic blood pressure 2
A230056J06Rik 13 59580176 to 59585223 5047 - lncRNA gene RIKEN cDNA A230056J06 gene
Cpgi5739 13 59585037 to 59586039 1002 CpG island CpG island 5739
Tssr120097 13 59585301 to 59585325 24 + TSS region transcription start site region 120097
Naa35 13 59585323 to 59634798 49475 + protein coding gene N(alpha)-acetyltransferase 35, NatC auxiliary subunit
Tssr120098 13 59585348 to 59585441 93 + TSS region transcription start site region 120098
Gm47246 13 59603309 to 59605662 2353 + unclassified gene predicted gene, 47246
Tssr120099 13 59625139 to 59625165 26 + TSS region transcription start site region 120099
Golm1 13 59634996 to 59675784 40788 - protein coding gene golgi membrane protein 1
Tssr122874 13 59640153 to 59640172 19 - TSS region transcription start site region 122874
Tssr122875 13 59640179 to 59640189 10 - TSS region transcription start site region 122875
Tssr4093 13 59640215 to 59640237 22 - TSS region transcription start site region 4093
Tssr120100 13 59656567 to 59656582 15 + TSS region transcription start site region 120100
Tssr120101 13 59657242 to 59657260 18 + TSS region transcription start site region 120101
Tssr122876 13 59672009 to 59672013 4 - TSS region transcription start site region 122876
D13Mit186 13 59673645 to 59673791 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 186
Cpgi5740 13 59674898 to 59676048 1150 CpG island CpG island 5740
Tssr122877 13 59675754 to 59675814 60 - TSS region transcription start site region 122877
4921517D22Rik 13 59687402 to 59694103 6701 - protein coding gene RIKEN cDNA 4921517D22 gene
Gm47269 13 59688371 to 59688791 420 + pseudogene predicted gene, 47269
D13Mit252 13 59691359 to 59691443 84 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 252
Tssr122878 13 59694100 to 59694108 8 - TSS region transcription start site region 122878
Spata31d1a 13 59700083 to 59706588 6505 - protein coding gene spermatogenesis associated 31 subfamily D, member 1A