Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:58998845-59353801

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ntrk2 13 58806569 to 59133970 327401 + protein coding gene neurotrophic tyrosine kinase, receptor, type 2
Cpgi5732 13 59011371 to 59011619 248 CpG island CpG island 5732
4930415C11Rik 13 59054896 to 59084093 29197 - antisense lncRNA gene RIKEN cDNA 4930415C11 gene
Cpgi5733 13 59060143 to 59060399 256 CpG island CpG island 5733
Cpgi5734 13 59073913 to 59074278 365 CpG island CpG island 5734
Gm34245 13 59075440 to 59078296 2856 - lncRNA gene predicted gene, 34245
Tssr122862 13 59084230 to 59084244 14 - TSS region transcription start site region 122862
Cpgi5735 13 59133064 to 59133284 220 CpG island CpG island 5735
Tssr120091 13 59133375 to 59133379 4 + TSS region transcription start site region 120091
Gm34307 13 59144257 to 59145828 1571 - lincRNA gene predicted gene, 34307
Tssr122863 13 59145824 to 59145857 33 - TSS region transcription start site region 122863
Gm34354 13 59148845 to 59203801 54956 + lincRNA gene predicted gene, 34354
Gm47359 13 59170633 to 59182816 12183 - lincRNA gene predicted gene, 47359
Tssr122864 13 59182784 to 59182787 3 - TSS region transcription start site region 122864
Gm34558 13 59211622 to 59217172 5550 - lincRNA gene predicted gene, 34558
Tssr122865 13 59229275 to 59229282 7 - TSS region transcription start site region 122865
Gm34672 13 59235750 to 59255411 19661 - lincRNA gene predicted gene, 34672
Tssr122866 13 59242613 to 59242617 4 - TSS region transcription start site region 122866
Gm47360 13 59294819 to 59330243 35424 - lincRNA gene predicted gene, 47360
Cpgi5736 13 59342125 to 59342302 177 CpG island CpG island 5736