Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:58348021-58539580

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kif27 13 58287502 to 58359122 71620 - protein coding gene kinesin family member 27
Cpgi5725 13 58358564 to 58359581 1017 CpG island CpG island 5725
Tssr122836 13 58358754 to 58358762 8 - TSS region transcription start site region 122836
Tssr122837 13 58358781 to 58358799 18 - TSS region transcription start site region 122837
Tssr122838 13 58358814 to 58358823 9 - TSS region transcription start site region 122838
Tssr122839 13 58359022 to 58359066 44 - TSS region transcription start site region 122839
Tssr122840 13 58359077 to 58359122 45 - TSS region transcription start site region 122840
Tssr120076 13 58364599 to 58364618 19 + TSS region transcription start site region 120076
Tssr122841 13 58365193 to 58365195 2 - TSS region transcription start site region 122841
2210016F16Rik 13 58380046 to 58385225 5179 - protein coding gene RIKEN cDNA 2210016F16 gene
Cpgi5726 13 58384519 to 58385699 1180 CpG island CpG island 5726
Tssr122842 13 58385162 to 58385169 7 - TSS region transcription start site region 122842
Tssr122843 13 58385176 to 58385188 12 - TSS region transcription start site region 122843
Tssr122844 13 58385190 to 58385242 52 - TSS region transcription start site region 122844
Hnrnpk 13 58391142 to 58403343 12201 - protein coding gene heterogeneous nuclear ribonucleoprotein K
Tssr122845 13 58391922 to 58391926 4 - TSS region transcription start site region 122845
Mir7-1 13 58392779 to 58392886 107 - miRNA gene microRNA 7-1
Tssr122846 13 58392795 to 58392799 4 - TSS region transcription start site region 122846
Tssr122847 13 58399145 to 58399186 41 - TSS region transcription start site region 122847
Tssr122848 13 58400488 to 58400492 4 - TSS region transcription start site region 122848
Cpgi5727 13 58400995 to 58403480 2485 CpG island CpG island 5727
Tssr122849 13 58401520 to 58401590 70 - TSS region transcription start site region 122849
Tssr4089 13 58402030 to 58402059 29 - TSS region transcription start site region 4089
Tssr122850 13 58402119 to 58402149 30 - TSS region transcription start site region 122850
Tssr120077 13 58402233 to 58402261 28 + TSS region transcription start site region 120077
Rmi1 13 58402248 to 58411148 8900 + protein coding gene RecQ mediated genome instability 1
Tssr122851 13 58402449 to 58402472 23 - TSS region transcription start site region 122851
Tssr122852 13 58402476 to 58402524 48 - TSS region transcription start site region 122852
Tssr122853 13 58402533 to 58402534 1 - TSS region transcription start site region 122853
Tssr120078 13 58402546 to 58402578 32 + TSS region transcription start site region 120078
Tssr120079 13 58402685 to 58402705 20 + TSS region transcription start site region 120079
Tssr120080 13 58402708 to 58402727 19 + TSS region transcription start site region 120080
Gm47918 13 58443021 to 58444580 1559 + lincRNA gene predicted gene, 47918
Gm33875 13 58443406 to 58451773 8367 - lncRNA gene predicted gene, 33875
Cpgi5728 13 58453017 to 58453430 413 CpG island CpG island 5728
Gm40966 13 58470620 to 58477449 6829 - lncRNA gene predicted gene, 40966