Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:58310046-58455225

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kif27 13 58287502 to 58359122 71620 - protein coding gene kinesin family member 27
Mir6369 13 58313044 to 58313149 105 - miRNA gene microRNA 6369
Gm24284 13 58325267 to 58325408 141 + snoRNA gene predicted gene, 24284
Pas10 13 58341228 to 58341344 116 QTL pulmonary adenoma susceptibility 10
D13Mit279 13 58341228 to 58341344 116 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 279
Cpgi5725 13 58358564 to 58359581 1017 CpG island CpG island 5725
Tssr122836 13 58358754 to 58358762 8 - TSS region transcription start site region 122836
Tssr122837 13 58358781 to 58358799 18 - TSS region transcription start site region 122837
Tssr122838 13 58358814 to 58358823 9 - TSS region transcription start site region 122838
Tssr122839 13 58359022 to 58359066 44 - TSS region transcription start site region 122839
Tssr122840 13 58359077 to 58359122 45 - TSS region transcription start site region 122840
Tssr120076 13 58364599 to 58364618 19 + TSS region transcription start site region 120076
Tssr122841 13 58365193 to 58365195 2 - TSS region transcription start site region 122841
2210016F16Rik 13 58380046 to 58385225 5179 - protein coding gene RIKEN cDNA 2210016F16 gene
Cpgi5726 13 58384519 to 58385699 1180 CpG island CpG island 5726
Tssr122842 13 58385162 to 58385169 7 - TSS region transcription start site region 122842
Tssr122843 13 58385176 to 58385188 12 - TSS region transcription start site region 122843
Tssr122844 13 58385190 to 58385242 52 - TSS region transcription start site region 122844
Hnrnpk 13 58391142 to 58403343 12201 - protein coding gene heterogeneous nuclear ribonucleoprotein K
Tssr122845 13 58391922 to 58391926 4 - TSS region transcription start site region 122845
Mir7-1 13 58392779 to 58392886 107 - miRNA gene microRNA 7-1
Tssr122846 13 58392795 to 58392799 4 - TSS region transcription start site region 122846
Tssr122847 13 58399145 to 58399186 41 - TSS region transcription start site region 122847
Tssr122848 13 58400488 to 58400492 4 - TSS region transcription start site region 122848
Cpgi5727 13 58400995 to 58403480 2485 CpG island CpG island 5727
Tssr122849 13 58401520 to 58401590 70 - TSS region transcription start site region 122849
Tssr4089 13 58402030 to 58402059 29 - TSS region transcription start site region 4089
Tssr122850 13 58402119 to 58402149 30 - TSS region transcription start site region 122850
Tssr120077 13 58402233 to 58402261 28 + TSS region transcription start site region 120077
Rmi1 13 58402248 to 58411148 8900 + protein coding gene RecQ mediated genome instability 1
Tssr122851 13 58402449 to 58402472 23 - TSS region transcription start site region 122851
Tssr122852 13 58402476 to 58402524 48 - TSS region transcription start site region 122852
Tssr122853 13 58402533 to 58402534 1 - TSS region transcription start site region 122853
Tssr120078 13 58402546 to 58402578 32 + TSS region transcription start site region 120078
Tssr120079 13 58402685 to 58402705 20 + TSS region transcription start site region 120079
Tssr120080 13 58402708 to 58402727 19 + TSS region transcription start site region 120080
Gm47918 13 58443021 to 58444580 1559 + lincRNA gene predicted gene, 47918
Gm33875 13 58443406 to 58451773 8367 - lncRNA gene predicted gene, 33875
Cpgi5728 13 58453017 to 58453430 413 CpG island CpG island 5728