Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:58209340-58339364

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ubqln1 13 58176156 to 58215653 39497 - protein coding gene ubiquilin 1
Cpgi5723 13 58214864 to 58216317 1453 CpG island CpG island 5723
Tssr120068 13 58214928 to 58214934 6 + TSS region transcription start site region 120068
Tssr122819 13 58215558 to 58215612 54 - TSS region transcription start site region 122819
Tssr122820 13 58215615 to 58215662 47 - TSS region transcription start site region 122820
Tssr120069 13 58215690 to 58215719 29 + TSS region transcription start site region 120069
Gm48432 13 58218719 to 58219276 557 + pseudogene predicted gene, 48432
Gm48441 13 58232143 to 58236750 4607 + antisense lncRNA gene predicted gene, 48441
Gkap1 13 58233346 to 58274839 41493 - protein coding gene G kinase anchoring protein 1
Tssr4087 13 58263229 to 58263243 14 + TSS region transcription start site region 4087
Tssr120070 13 58263940 to 58263969 29 + TSS region transcription start site region 120070
Tssr120071 13 58263976 to 58263989 13 + TSS region transcription start site region 120071
Tssr122821 13 58264731 to 58264736 5 - TSS region transcription start site region 122821
Tssr122822 13 58271921 to 58271925 4 - TSS region transcription start site region 122822
Cpgi5724 13 58273351 to 58275259 1908 CpG island CpG island 5724
Tssr122823 13 58274096 to 58274115 19 - TSS region transcription start site region 122823
Tssr122824 13 58274121 to 58274207 86 - TSS region transcription start site region 122824
Tssr120072 13 58274252 to 58274280 28 + TSS region transcription start site region 120072
Tssr122825 13 58274263 to 58274338 75 - TSS region transcription start site region 122825
Tssr122826 13 58274340 to 58274364 24 - TSS region transcription start site region 122826
Tssr122827 13 58274367 to 58274377 10 - TSS region transcription start site region 122827
Tssr122828 13 58274461 to 58274495 34 - TSS region transcription start site region 122828
Tssr122829 13 58274504 to 58274518 14 - TSS region transcription start site region 122829
Tssr122830 13 58274833 to 58274851 18 - TSS region transcription start site region 122830
Tssr122831 13 58275647 to 58275651 4 - TSS region transcription start site region 122831
Tssr122832 13 58275700 to 58275703 3 - TSS region transcription start site region 122832
Tssr120073 13 58281158 to 58281171 13 + TSS region transcription start site region 120073
Tssr4088 13 58281174 to 58281180 6 + TSS region transcription start site region 4088
Gm26555 13 58281183 to 58299145 17962 + antisense lncRNA gene predicted gene, 26555
Tssr120074 13 58281186 to 58281196 10 + TSS region transcription start site region 120074
Tssr120075 13 58281213 to 58281218 5 + TSS region transcription start site region 120075
Kif27 13 58287502 to 58359122 71620 - protein coding gene kinesin family member 27
Tssr122833 13 58291686 to 58291689 3 - TSS region transcription start site region 122833
Tssr122834 13 58291706 to 58291711 5 - TSS region transcription start site region 122834
Tssr122835 13 58291733 to 58291742 9 - TSS region transcription start site region 122835
Mir6369 13 58313044 to 58313149 105 - miRNA gene microRNA 6369
Gm24284 13 58325267 to 58325408 141 + snoRNA gene predicted gene, 24284