Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:57887862-58127869

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spock1 13 57421195 to 57908332 487137 - protein coding gene sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1
Cpgi5714 13 57907228 to 57908622 1394 CpG island CpG island 5714
Tssr122800 13 57908310 to 57908321 11 - TSS region transcription start site region 122800
Tssr122801 13 57908324 to 57908339 15 - TSS region transcription start site region 122801
D13Mit52 13 57908830 to 57908975 145 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 52
Cpgi5715 13 57995447 to 57995618 171 CpG island CpG island 5715
Klhl3 13 58000228 to 58113592 113364 - protein coding gene kelch-like 3
Tssr122802 13 58001848 to 58001853 5 - TSS region transcription start site region 122802
Tssr122803 13 58007862 to 58007869 7 - TSS region transcription start site region 122803
Tssr122804 13 58020945 to 58020950 5 - TSS region transcription start site region 122804
Mir874 13 58023125 to 58023200 75 - miRNA gene microRNA 874
Cpgi5716 13 58067844 to 58067997 153 CpG island CpG island 5716
Cpgi5717 13 58071248 to 58071691 443 CpG island CpG island 5717
Tssr120058 13 58071483 to 58071489 6 + TSS region transcription start site region 120058
Tssr120059 13 58071521 to 58071530 9 + TSS region transcription start site region 120059
Gm33389 13 58071690 to 58113135 41445 + lncRNA gene predicted gene, 33389
Tssr120060 13 58073259 to 58073294 35 + TSS region transcription start site region 120060
Cpgi5718 13 58095089 to 58095453 364 CpG island CpG island 5718
D530015H24Rik 13 58098287 to 58099339 1052 unclassified gene RIKEN cDNA D530015H24 gene
Cpgi5719 13 58112873 to 58113818 945 CpG island CpG island 5719
Tssr122805 13 58113281 to 58113297 16 - TSS region transcription start site region 122805
Tssr122806 13 58113595 to 58113620 25 - TSS region transcription start site region 122806
Tssr122807 13 58113621 to 58113655 34 - TSS region transcription start site region 122807
Tssr122808 13 58123411 to 58123428 17 - TSS region transcription start site region 122808
Hnrnpa0 13 58125879 to 58128556 2677 - protein coding gene heterogeneous nuclear ribonucleoprotein A0
Tssr122809 13 58126779 to 58126792 13 - TSS region transcription start site region 122809
Tssr122810 13 58127043 to 58127065 22 - TSS region transcription start site region 122810
Tssr122811 13 58127104 to 58127116 12 - TSS region transcription start site region 122811
Cpgi5720 13 58127208 to 58129583 2375 CpG island CpG island 5720
Tssr122812 13 58127612 to 58127631 19 - TSS region transcription start site region 122812