Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:56892452-57596455

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trpc7 13 56773113 to 56895993 122880 - protein coding gene transient receptor potential cation channel, subfamily C, member 7
Cpgi5711 13 56895429 to 56895697 268 CpG island CpG island 5711
Tssr122794 13 56895774 to 56895793 19 - TSS region transcription start site region 122794
Gm22777 13 56930820 to 56930948 128 - snoRNA gene predicted gene, 22777
Gm40962 13 56963730 to 56964660 930 + lncRNA gene predicted gene, 40962
Tssr120056 13 56963841 to 56963845 4 + TSS region transcription start site region 120056
Gm33140 13 56993712 to 57003774 10062 + lncRNA gene predicted gene, 33140
Gm48174 13 57239847 to 57240255 408 + pseudogene predicted gene, 48174
Gm33197 13 57242452 to 57246455 4003 - lncRNA gene predicted gene, 33197
Gm48176 13 57276678 to 57277128 450 + pseudogene predicted gene, 48176
Cpgi5712 13 57282223 to 57282403 180 CpG island CpG island 5712
Tssr120057 13 57282345 to 57282365 20 + TSS region transcription start site region 120057
1700072F12Rik 13 57282363 to 57283266 903 + lncRNA gene RIKEN cDNA 1700072F12 gene
Gm33294 13 57294128 to 57440352 146224 + lncRNA gene predicted gene, 33294
Tssr4085 13 57332010 to 57332011 1 + TSS region transcription start site region 4085
Cpgi5713 13 57338108 to 57338391 283 CpG island CpG island 5713
Spock1 13 57421195 to 57908332 487137 - protein coding gene sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1
Tssr122795 13 57426363 to 57426367 4 - TSS region transcription start site region 122795
Gm33240 13 57445000 to 57450938 5938 + lncRNA gene predicted gene, 33240
Tssr122796 13 57455160 to 57455164 4 - TSS region transcription start site region 122796
D13Mit65 13 57575805 to 57575941 136 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 65