Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:56456112-56597002

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc25a48 13 56437964 to 56472367 34403 + protein coding gene solute carrier family 25, member 48
Tssr122782 13 56472420 to 56472426 6 - TSS region transcription start site region 122782
Il9 13 56479277 to 56482246 2969 - protein coding gene interleukin 9
rsl 13 56481436 to 72237021 15755585 heritable phenotypic marker regulator of sex limited protein-Slp
D13Mit13 13 56481436 to 56481584 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 13
Bmd13 13 56481436 to 56481584 148 QTL bone mineral density 13
Bwem2 13 56481436 to 56481584 148 QTL body weight day 30 males 2
Cia28 13 56481436 to 96102654 39621218 QTL collagen induced arthritis QTL 28
Cpfd5 13 56481436 to 56481584 148 QTL cerebellum pattern fissures, declival 5
Tssr122783 13 56482153 to 56482197 44 - TSS region transcription start site region 122783
Tssr122784 13 56482255 to 56482258 3 - TSS region transcription start site region 122784
Tssr122785 13 56488101 to 56488131 30 - TSS region transcription start site region 122785
Tssr120019 13 56502088 to 56502101 13 + TSS region transcription start site region 120019
Tssr122786 13 56503793 to 56503796 3 - TSS region transcription start site region 122786
Tssr120020 13 56505888 to 56505919 31 + TSS region transcription start site region 120020
Cpgi5703 13 56522141 to 56522843 702 CpG island CpG island 5703
Tssr120021 13 56522449 to 56522495 46 + TSS region transcription start site region 120021
Fbxl21 13 56522472 to 56537898 15426 + protein coding gene F-box and leucine-rich repeat protein 21
Tssr120022 13 56522497 to 56522516 19 + TSS region transcription start site region 120022
Tssr120023 13 56522520 to 56522540 20 + TSS region transcription start site region 120023
Gm38602 13 56526112 to 56527002 890 - lncRNA gene predicted gene, 38602
Lect2 13 56542464 to 56548502 6038 - protein coding gene leukocyte cell-derived chemotaxin 2
D13Bc1 13 56544585 to 56544686 101 DNA segment DNA segment, Chr 13, University of British Columbia 1
Tssr122787 13 56548418 to 56548468 50 - TSS region transcription start site region 122787
Tssr122788 13 56548474 to 56548487 13 - TSS region transcription start site region 122788
Tssr122789 13 56548502 to 56548518 16 - TSS region transcription start site region 122789
Tssr122790 13 56548534 to 56548547 13 - TSS region transcription start site region 122790
Gm32759 13 56585690 to 56591754 6064 + lncRNA gene predicted gene, 32759
2010203P06Rik 13 56595537 to 56596642 1105 + lincRNA gene RIKEN cDNA 2010203P06 gene
Tssr120024 13 56596324 to 56596355 31 + TSS region transcription start site region 120024