Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:56382088-56622101

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46418 13 56382708 to 56423812 41104 + lncRNA gene predicted gene, 46418
Tssr122781 13 56426501 to 56426508 7 - TSS region transcription start site region 122781
Tssr120012 13 56426582 to 56426593 11 + TSS region transcription start site region 120012
Gm3045 13 56426594 to 56433753 7159 + protein coding gene predicted gene 3045
Tssr120013 13 56426612 to 56426624 12 + TSS region transcription start site region 120013
Slc25a48 13 56437964 to 56472367 34403 + protein coding gene solute carrier family 25, member 48
Cpgi5702 13 56438269 to 56438779 510 CpG island CpG island 5702
Tssr120014 13 56438302 to 56438324 22 + TSS region transcription start site region 120014
Tssr120015 13 56438343 to 56438369 26 + TSS region transcription start site region 120015
Tssr120016 13 56438381 to 56438393 12 + TSS region transcription start site region 120016
Tssr120017 13 56438915 to 56438917 2 + TSS region transcription start site region 120017
Tssr120018 13 56441471 to 56441475 4 + TSS region transcription start site region 120018
Tssr122782 13 56472420 to 56472426 6 - TSS region transcription start site region 122782
Il9 13 56479277 to 56482246 2969 - protein coding gene interleukin 9
rsl 13 56481436 to 72237021 15755585 heritable phenotypic marker regulator of sex limited protein-Slp
Bwem2 13 56481436 to 56481584 148 QTL body weight day 30 males 2
Cia28 13 56481436 to 96102654 39621218 QTL collagen induced arthritis QTL 28
Cpfd5 13 56481436 to 56481584 148 QTL cerebellum pattern fissures, declival 5
D13Mit13 13 56481436 to 56481584 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 13
Bmd13 13 56481436 to 56481584 148 QTL bone mineral density 13
Tssr122783 13 56482153 to 56482197 44 - TSS region transcription start site region 122783
Tssr122784 13 56482255 to 56482258 3 - TSS region transcription start site region 122784
Tssr122785 13 56488101 to 56488131 30 - TSS region transcription start site region 122785
Tssr120019 13 56502088 to 56502101 13 + TSS region transcription start site region 120019
Tssr122786 13 56503793 to 56503796 3 - TSS region transcription start site region 122786
Tssr120020 13 56505888 to 56505919 31 + TSS region transcription start site region 120020
Cpgi5703 13 56522141 to 56522843 702 CpG island CpG island 5703
Tssr120021 13 56522449 to 56522495 46 + TSS region transcription start site region 120021
Fbxl21 13 56522472 to 56537898 15426 + protein coding gene F-box and leucine-rich repeat protein 21
Tssr120022 13 56522497 to 56522516 19 + TSS region transcription start site region 120022
Tssr120023 13 56522520 to 56522540 20 + TSS region transcription start site region 120023
Gm38602 13 56526112 to 56527002 890 - lncRNA gene predicted gene, 38602
Lect2 13 56542464 to 56548502 6038 - protein coding gene leukocyte cell-derived chemotaxin 2
D13Bc1 13 56544585 to 56544686 101 DNA segment DNA segment, Chr 13, University of British Columbia 1
Tssr122787 13 56548418 to 56548468 50 - TSS region transcription start site region 122787
Tssr122788 13 56548474 to 56548487 13 - TSS region transcription start site region 122788
Tssr122789 13 56548502 to 56548518 16 - TSS region transcription start site region 122789
Tssr122790 13 56548534 to 56548547 13 - TSS region transcription start site region 122790
Gm32759 13 56585690 to 56591754 6064 + lncRNA gene predicted gene, 32759
2010203P06Rik 13 56595537 to 56596642 1105 + lincRNA gene RIKEN cDNA 2010203P06 gene
Tssr120024 13 56596324 to 56596355 31 + TSS region transcription start site region 120024
Gm10781 13 56601418 to 56602562 1144 protein coding gene predicted gene 10781
Tssr120025 13 56609233 to 56609257 24 + TSS region transcription start site region 120025
Tssr120026 13 56609281 to 56609300 19 + TSS region transcription start site region 120026
Cpgi5704 13 56609288 to 56609938 650 CpG island CpG island 5704
Tssr120027 13 56609332 to 56609358 26 + TSS region transcription start site region 120027
Tssr120028 13 56609488 to 56609489 1 + TSS region transcription start site region 120028
Tssr120029 13 56609513 to 56609515 2 + TSS region transcription start site region 120029
Tssr120030 13 56609516 to 56609606 90 + TSS region transcription start site region 120030
Tgfbi 13 56609603 to 56639339 29736 + protein coding gene transforming growth factor, beta induced
Tssr120031 13 56609608 to 56609628 20 + TSS region transcription start site region 120031
Tssr120032 13 56609646 to 56609648 2 + TSS region transcription start site region 120032
Tssr120033 13 56613825 to 56613844 19 + TSS region transcription start site region 120033
Tssr120034 13 56614254 to 56614274 20 + TSS region transcription start site region 120034
D13Mit251 13 56614737 to 56614855 118 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 251