Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:56216350-56376367

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5698 13 56221160 to 56222712 1552 CpG island CpG island 5698
4930550C17Rik 13 56222224 to 56243940 21716 - lincRNA gene RIKEN cDNA 4930550C17 gene
Neurog1 13 56250492 to 56252163 1671 - protein coding gene neurogenin 1
Cpgi5699 13 56251165 to 56252776 1611 CpG island CpG island 5699
Tssr122772 13 56252175 to 56252181 6 - TSS region transcription start site region 122772
Cpgi5700 13 56258349 to 56259702 1353 CpG island CpG island 5700
Cxcl14 13 56288643 to 56296551 7908 - protein coding gene chemokine (C-X-C motif) ligand 14
Tssr120010 13 56288645 to 56288651 6 + TSS region transcription start site region 120010
Tssr122773 13 56288916 to 56288963 47 - TSS region transcription start site region 122773
Tssr122774 13 56289193 to 56289211 18 - TSS region transcription start site region 122774
Tssr122775 13 56289331 to 56289368 37 - TSS region transcription start site region 122775
Cpgi5701 13 56295665 to 56296953 1288 CpG island CpG island 5701
Tssr122776 13 56295894 to 56295907 13 - TSS region transcription start site region 122776
Tssr122777 13 56296327 to 56296347 20 - TSS region transcription start site region 122777
Tssr122778 13 56296350 to 56296367 17 - TSS region transcription start site region 122778
Tssr122779 13 56296373 to 56296399 26 - TSS region transcription start site region 122779
Gm17878 13 56318325 to 56320334 2009 - pseudogene predicted gene, 17878
D13Mit250 13 56322643 to 56322770 127 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 250
Sgp3 13 56322643 to 76823195 20500552 QTL serum gp70 production 3
4933404M09Rik 13 56337705 to 56339975 2270 unclassified gene RIKEN cDNA 4933404M09 gene
Gm24716 13 56342425 to 56342528 103 - snRNA gene predicted gene, 24716
Gm32003 13 56345760 to 56348847 3087 + lncRNA gene predicted gene, 32003
Gm40960 13 56346559 to 56357181 10622 - lncRNA gene predicted gene, 40960
D13Mit184 13 56347540 to 56347710 170 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 184
Tssr122780 13 56357189 to 56357205 16 - TSS region transcription start site region 122780
Gm10782 13 56362900 to 56368857 5957 + lincRNA gene predicted gene 10782
Tssr120011 13 56372631 to 56372636 5 + TSS region transcription start site region 120011
Sgp5 13 105285678 to 56322643 -48963035 QTL serum gp70 production 5