Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Pcbd2 | 13 | 49462 | + | protein coding gene | pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 | |
Tssr122723 | 13 | 1 | - | TSS region | transcription start site region 122723 | |
4930451E10Rik | 13 | 9050 | - | antisense lncRNA gene | RIKEN cDNA 4930451E10 gene | |
Tssr122724 | 13 | 10 | - | TSS region | transcription start site region 122724 | |
Tssr122725 | 13 | 8 | - | TSS region | transcription start site region 122725 | |
Tssr119985 | 13 | 6 | + | TSS region | transcription start site region 119985 | |
Catsper3 | 13 | 24430 | + | protein coding gene | cation channel, sperm associated 3 | |
Tssr119986 | 13 | 25 | + | TSS region | transcription start site region 119986 | |
Tssr119987 | 13 | 5 | + | TSS region | transcription start site region 119987 | |
Cpgi5688 | 13 | 1743 | CpG island | CpG island 5688 | ||
Pitx1 | 13 | 11141 | - | protein coding gene | paired-like homeodomain transcription factor 1 | |
Cpgi5689 | 13 | 667 | CpG island | CpG island 5689 | ||
Cpgi5690 | 13 | 2040 | CpG island | CpG island 5690 | ||
Tssr122726 | 13 | 31 | - | TSS region | transcription start site region 122726 | |
Tssr122727 | 13 | 17 | - | TSS region | transcription start site region 122727 | |
Tssr122728 | 13 | 17 | - | TSS region | transcription start site region 122728 | |
Gm28760 | 13 | 735 | - | lincRNA gene | predicted gene 28760 | |
Cpgi5691 | 13 | 1134 | CpG island | CpG island 5691 | ||
Tssr122729 | 13 | 28 | - | TSS region | transcription start site region 122729 | |
Tssr122730 | 13 | 49 | - | TSS region | transcription start site region 122730 | |
Cpgi5692 | 13 | 364 | CpG island | CpG island 5692 | ||
Tssr119988 | 13 | 14 | + | TSS region | transcription start site region 119988 | |
Gm31542 | 13 | 5493 | - | lncRNA gene | predicted gene, 31542 | |
Tssr122731 | 13 | 1 | - | TSS region | transcription start site region 122731 | |
Tssr119989 | 13 | 8 | + | TSS region | transcription start site region 119989 | |
Tssr119990 | 13 | 14 | + | TSS region | transcription start site region 119990 | |
Tssr119991 | 13 | 4 | + | TSS region | transcription start site region 119991 | |
Tssr119992 | 13 | 27 | + | TSS region | transcription start site region 119992 | |
Tssr119993 | 13 | 12 | + | TSS region | transcription start site region 119993 | |
Tssr119994 | 13 | 14 | + | TSS region | transcription start site region 119994 | |
Tssr119995 | 13 | 10 | + | TSS region | transcription start site region 119995 | |
Gm47071 | 13 | 82584 | + | antisense lncRNA gene | predicted gene, 47071 | |
Tssr119996 | 13 | 9 | + | TSS region | transcription start site region 119996 | |
Gm47072 | 13 | 2850 | - | pseudogene | predicted gene, 47072 | |
Tssr119997 | 13 | 7 | + | TSS region | transcription start site region 119997 | |
Tssr119998 | 13 | 3 | + | TSS region | transcription start site region 119998 | |
H2afy | 13 | 62004 | - | protein coding gene | H2A histone family, member Y | |
Tssr122732 | 13 | 14 | - | TSS region | transcription start site region 122732 | |
Tssr122733 | 13 | 5 | - | TSS region | transcription start site region 122733 | |
Tssr122734 | 13 | 3 | - | TSS region | transcription start site region 122734 | |
Tssr122735 | 13 | 36 | - | TSS region | transcription start site region 122735 | |
Tssr122736 | 13 | 15 | - | TSS region | transcription start site region 122736 | |
Tssr119999 | 13 | 17 | + | TSS region | transcription start site region 119999 | |
Cpgi5693 | 13 | 164 | CpG island | CpG island 5693 | ||
Tssr122737 | 13 | 13 | - | TSS region | transcription start site region 122737 | |
Tssr120000 | 13 | 16 | + | TSS region | transcription start site region 120000 | |
Gm31485 | 13 | 6266 | - | lncRNA gene | predicted gene, 31485 | |
Cpgi5694 | 13 | 183 | CpG island | CpG island 5694 | ||
D13Mit113 | 13 | 148 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 113 | ||
Mdac | 13 | 8833775 | heritable phenotypic marker | modifier of Dac | ||
Tssr122738 | 13 | 10 | - | TSS region | transcription start site region 122738 | |
Tssr4082 | 13 | 14 | + | TSS region | transcription start site region 4082 | |
Tssr4083 | 13 | 5 | + | TSS region | transcription start site region 4083 | |
Cpgi5695 | 13 | 1434 | CpG island | CpG island 5695 | ||
Tssr122739 | 13 | 11 | - | TSS region | transcription start site region 122739 | |
Tssr122740 | 13 | 11 | - | TSS region | transcription start site region 122740 | |
Tssr122741 | 13 | 36 | - | TSS region | transcription start site region 122741 | |
Tssr122742 | 13 | 20 | - | TSS region | transcription start site region 122742 | |
Tssr122743 | 13 | 26 | - | TSS region | transcription start site region 122743 | |
Tssr122744 | 13 | 12 | - | TSS region | transcription start site region 122744 | |
Tssr122745 | 13 | 12 | - | TSS region | transcription start site region 122745 | |
Tssr122746 | 13 | 26 | - | TSS region | transcription start site region 122746 | |
Tssr122747 | 13 | 11 | - | TSS region | transcription start site region 122747 | |
Tssr122748 | 13 | 15 | - | TSS region | transcription start site region 122748 | |
Tssr122749 | 13 | 8 | - | TSS region | transcription start site region 122749 | |
Tssr122750 | 13 | 5 | - | TSS region | transcription start site region 122750 | |
Tssr122751 | 13 | 12 | - | TSS region | transcription start site region 122751 | |
Tssr122752 | 13 | 34 | - | TSS region | transcription start site region 122752 | |
Tssr122753 | 13 | 14 | - | TSS region | transcription start site region 122753 | |
Tssr122754 | 13 | 49 | - | TSS region | transcription start site region 122754 | |
Tssr122755 | 13 | 14 | - | TSS region | transcription start site region 122755 | |
Tssr120001 | 13 | 11 | + | TSS region | transcription start site region 120001 | |
Tssr120002 | 13 | 4 | + | TSS region | transcription start site region 120002 | |
Cpgi5696 | 13 | 208 | CpG island | CpG island 5696 | ||
Tssr120003 | 13 | 41 | + | TSS region | transcription start site region 120003 | |
Tssr122756 | 13 | 11 | - | TSS region | transcription start site region 122756 | |
Tssr120004 | 13 | 15 | + | TSS region | transcription start site region 120004 | |
Tssr120005 | 13 | 8 | + | TSS region | transcription start site region 120005 | |
Tssr120006 | 13 | 21 | + | TSS region | transcription start site region 120006 | |
Tssr120007 | 13 | 3 | + | TSS region | transcription start site region 120007 | |
Gm31657 | 13 | 26944 | + | lncRNA gene | predicted gene, 31657 | |
Gm25148 | 13 | 122 | + | snoRNA gene | predicted gene, 25148 | |
Tssr122757 | 13 | 4 | - | TSS region | transcription start site region 122757 | |
Tssr120008 | 13 | 11 | + | TSS region | transcription start site region 120008 | |
Tifab | 13 | 5181 | - | protein coding gene | TRAF-interacting protein with forkhead-associated domain, family member B | |
Tssr122758 | 13 | 25 | - | TSS region | transcription start site region 122758 | |
Tssr122759 | 13 | 17 | - | TSS region | transcription start site region 122759 | |
Tssr122760 | 13 | 22 | - | TSS region | transcription start site region 122760 | |
Tssr122761 | 13 | 11 | - | TSS region | transcription start site region 122761 | |
Tssr122762 | 13 | 36 | - | TSS region | transcription start site region 122762 | |
Tssr122763 | 13 | 7 | - | TSS region | transcription start site region 122763 | |
Tssr122764 | 13 | 70 | - | TSS region | transcription start site region 122764 | |
Tssr122765 | 13 | 14 | - | TSS region | transcription start site region 122765 | |
Tssr122766 | 13 | 11 | - | TSS region | transcription start site region 122766 | |
Tssr122767 | 13 | 33 | - | TSS region | transcription start site region 122767 | |
Tssr122768 | 13 | 5 | - | TSS region | transcription start site region 122768 | |
Tssr122769 | 13 | 14 | - | TSS region | transcription start site region 122769 | |
Tssr122770 | 13 | 11 | - | TSS region | transcription start site region 122770 | |
Tssr120009 | 13 | 23 | + | TSS region | transcription start site region 120009 | |
Tssr122771 | 13 | 13 | - | TSS region | transcription start site region 122771 | |
Gm47104 | 13 | 706 | - | pseudogene | predicted gene, 47104 | |
Cpgi5697 | 13 | 204 | CpG island | CpG island 5697 | ||
Cpgi5698 | 13 | 1552 | CpG island | CpG island 5698 | ||
4930550C17Rik | 13 | 21716 | - | lincRNA gene | RIKEN cDNA 4930550C17 gene | |
Neurog1 | 13 | 1671 | - | protein coding gene | neurogenin 1 | |
Cpgi5699 | 13 | 1611 | CpG island | CpG island 5699 | ||
Tssr122772 | 13 | 6 | - | TSS region | transcription start site region 122772 | |
Cpgi5700 | 13 | 1353 | CpG island | CpG island 5700 | ||
Cxcl14 | 13 | 7908 | - | protein coding gene | chemokine (C-X-C motif) ligand 14 | |
Tssr120010 | 13 | 6 | + | TSS region | transcription start site region 120010 | |
Tssr122773 | 13 | 47 | - | TSS region | transcription start site region 122773 | |
Tssr122774 | 13 | 18 | - | TSS region | transcription start site region 122774 | |
Tssr122775 | 13 | 37 | - | TSS region | transcription start site region 122775 | |
Cpgi5701 | 13 | 1288 | CpG island | CpG island 5701 | ||
Tssr122776 | 13 | 13 | - | TSS region | transcription start site region 122776 | |
Tssr122777 | 13 | 20 | - | TSS region | transcription start site region 122777 | |
Tssr122778 | 13 | 17 | - | TSS region | transcription start site region 122778 | |
Tssr122779 | 13 | 26 | - | TSS region | transcription start site region 122779 | |
Gm17878 | 13 | 2009 | - | pseudogene | predicted gene, 17878 | |
Sgp3 | 13 | 20500552 | QTL | serum gp70 production 3 | ||
D13Mit250 | 13 | 127 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 250 | ||
4933404M09Rik | 13 | 2270 | unclassified gene | RIKEN cDNA 4933404M09 gene | ||
Gm24716 | 13 | 103 | - | snRNA gene | predicted gene, 24716 | |
Gm32003 | 13 | 3087 | + | lncRNA gene | predicted gene, 32003 | |
Gm40960 | 13 | 10622 | - | lncRNA gene | predicted gene, 40960 | |
D13Mit184 | 13 | 170 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 184 | ||
Tssr122780 | 13 | 16 | - | TSS region | transcription start site region 122780 | |
Gm10782 | 13 | 5957 | + | lincRNA gene | predicted gene 10782 | |
Tssr120011 | 13 | 5 | + | TSS region | transcription start site region 120011 | |
Gm46418 | 13 | 41104 | + | lncRNA gene | predicted gene, 46418 | |
Tssr122781 | 13 | 7 | - | TSS region | transcription start site region 122781 | |
Tssr120012 | 13 | 11 | + | TSS region | transcription start site region 120012 | |
Gm3045 | 13 | 7159 | + | protein coding gene | predicted gene 3045 | |
Tssr120013 | 13 | 12 | + | TSS region | transcription start site region 120013 | |
Slc25a48 | 13 | 34403 | + | protein coding gene | solute carrier family 25, member 48 | |
Cpgi5702 | 13 | 510 | CpG island | CpG island 5702 | ||
Tssr120014 | 13 | 22 | + | TSS region | transcription start site region 120014 | |
Tssr120015 | 13 | 26 | + | TSS region | transcription start site region 120015 | |
Tssr120016 | 13 | 12 | + | TSS region | transcription start site region 120016 | |
Tssr120017 | 13 | 2 | + | TSS region | transcription start site region 120017 | |
Tssr120018 | 13 | 4 | + | TSS region | transcription start site region 120018 | |
Tssr122782 | 13 | 6 | - | TSS region | transcription start site region 122782 | |
Il9 | 13 | 2969 | - | protein coding gene | interleukin 9 | |
Bwem2 | 13 | 148 | QTL | body weight day 30 males 2 | ||
Cia28 | 13 | 39621218 | QTL | collagen induced arthritis QTL 28 | ||
Cpfd5 | 13 | 148 | QTL | cerebellum pattern fissures, declival 5 | ||
Bmd13 | 13 | 148 | QTL | bone mineral density 13 | ||
D13Mit13 | 13 | 148 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 13 | ||
rsl | 13 | 15755585 | heritable phenotypic marker | regulator of sex limited protein-Slp | ||
Tssr122783 | 13 | 44 | - | TSS region | transcription start site region 122783 | |
Tssr122784 | 13 | 3 | - | TSS region | transcription start site region 122784 | |
Tssr122785 | 13 | 30 | - | TSS region | transcription start site region 122785 | |
Tssr120019 | 13 | 13 | + | TSS region | transcription start site region 120019 | |
Tssr122786 | 13 | 3 | - | TSS region | transcription start site region 122786 | |
Tssr120020 | 13 | 31 | + | TSS region | transcription start site region 120020 | |
Cpgi5703 | 13 | 702 | CpG island | CpG island 5703 | ||
Tssr120021 | 13 | 46 | + | TSS region | transcription start site region 120021 | |
Fbxl21 | 13 | 15426 | + | protein coding gene | F-box and leucine-rich repeat protein 21 | |
Tssr120022 | 13 | 19 | + | TSS region | transcription start site region 120022 | |
Tssr120023 | 13 | 20 | + | TSS region | transcription start site region 120023 | |
Gm38602 | 13 | 890 | - | lncRNA gene | predicted gene, 38602 | |
Lect2 | 13 | 6038 | - | protein coding gene | leukocyte cell-derived chemotaxin 2 | |
D13Bc1 | 13 | 101 | DNA segment | DNA segment, Chr 13, University of British Columbia 1 | ||
Tssr122787 | 13 | 50 | - | TSS region | transcription start site region 122787 | |
Tssr122788 | 13 | 13 | - | TSS region | transcription start site region 122788 | |
Tssr122789 | 13 | 16 | - | TSS region | transcription start site region 122789 | |
Tssr122790 | 13 | 13 | - | TSS region | transcription start site region 122790 | |
Gm32759 | 13 | 6064 | + | lncRNA gene | predicted gene, 32759 | |
2010203P06Rik | 13 | 1105 | + | lincRNA gene | RIKEN cDNA 2010203P06 gene | |
Tssr120024 | 13 | 31 | + | TSS region | transcription start site region 120024 | |
Gm10781 | 13 | 1144 | protein coding gene | predicted gene 10781 | ||
Tssr120025 | 13 | 24 | + | TSS region | transcription start site region 120025 | |
Tssr120026 | 13 | 19 | + | TSS region | transcription start site region 120026 | |
Cpgi5704 | 13 | 650 | CpG island | CpG island 5704 | ||
Tssr120027 | 13 | 26 | + | TSS region | transcription start site region 120027 | |
Tssr120028 | 13 | 1 | + | TSS region | transcription start site region 120028 | |
Tssr120029 | 13 | 2 | + | TSS region | transcription start site region 120029 | |
Tssr120030 | 13 | 90 | + | TSS region | transcription start site region 120030 | |
Tgfbi | 13 | 29736 | + | protein coding gene | transforming growth factor, beta induced | |
Tssr120031 | 13 | 20 | + | TSS region | transcription start site region 120031 | |
Tssr120032 | 13 | 2 | + | TSS region | transcription start site region 120032 | |
Tssr120033 | 13 | 19 | + | TSS region | transcription start site region 120033 | |
Tssr120034 | 13 | 20 | + | TSS region | transcription start site region 120034 | |
D13Mit251 | 13 | 118 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 251 | ||
Tssr120035 | 13 | 32 | + | TSS region | transcription start site region 120035 | |
Tssr120036 | 13 | 36 | + | TSS region | transcription start site region 120036 | |
Tssr120037 | 13 | 24 | + | TSS region | transcription start site region 120037 | |
Tssr120038 | 13 | 41 | + | TSS region | transcription start site region 120038 | |
Tssr122791 | 13 | 15 | - | TSS region | transcription start site region 122791 | |
Tssr120039 | 13 | 36 | + | TSS region | transcription start site region 120039 | |
Tssr120040 | 13 | 13 | + | TSS region | transcription start site region 120040 | |
Tssr120041 | 13 | 27 | + | TSS region | transcription start site region 120041 | |
Tssr4084 | 13 | 20 | + | TSS region | transcription start site region 4084 | |
Tssr120042 | 13 | 15 | + | TSS region | transcription start site region 120042 | |
Tssr120043 | 13 | 8 | + | TSS region | transcription start site region 120043 | |
Tssr120044 | 13 | 14 | + | TSS region | transcription start site region 120044 | |
Gm40961 | 13 | 1786 | - | lncRNA gene | predicted gene, 40961 | |
Gm32965 | 13 | 7579 | - | lncRNA gene | predicted gene, 32965 | |
Gm32910 | 13 | 1740 | + | lncRNA gene | predicted gene, 32910 | |
Cpgi5705 | 13 | 453 | CpG island | CpG island 5705 |