Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:55570055-55630135

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tesq1 13 20431342 to 55572704 35141362 QTL testis weight QTL 1
Del(13Simc1-B4galt7)2Dja 13 54503779 to 55610443 1106664 chromosomal deletion deletion, Chr 13, David J Adams 2
Fam193b 13 55539316 to 55571120 31804 - protein coding gene family with sequence similarity 193, member B
Cpgi5680 13 55570259 to 55571622 1363 CpG island CpG island 5680
Tssr122720 13 55571087 to 55571108 21 - TSS region transcription start site region 122720
Tssr122721 13 55571118 to 55571123 5 - TSS region transcription start site region 122721
Gm31364 13 55571216 to 55574475 3259 + lncRNA gene predicted gene, 31364
D13Mit21 13 55572541 to 55572704 163 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 21
Cfbw5 13 55572545 to 55572704 159 QTL cystic fibrosis body weight 5
D13Mit20 13 55572545 to 55572704 159 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 20
Cpgi5681 13 55592938 to 55593635 697 CpG island CpG island 5681
Tmed9 13 55593135 to 55597697 4562 + protein coding gene transmembrane p24 trafficking protein 9
Tssr119967 13 55593137 to 55593177 40 + TSS region transcription start site region 119967
Tssr119968 13 55597302 to 55597311 9 + TSS region transcription start site region 119968
Cpgi5682 13 55599833 to 55600383 550 CpG island CpG island 5682
B4galt7 13 55599896 to 55610443 10547 + protein coding gene xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)
Tssr119969 13 55600055 to 55600135 80 + TSS region transcription start site region 119969
Gm15911 13 55602182 to 55604783 2601 - antisense lncRNA gene predicted gene 15911
Tssr119970 13 55609773 to 55609780 7 + TSS region transcription start site region 119970
Tssr119971 13 55609931 to 55609935 4 + TSS region transcription start site region 119971
Cpgi5683 13 55622628 to 55623527 899 CpG island CpG island 5683
Tssr119972 13 55622999 to 55623084 85 + TSS region transcription start site region 119972
Caml 13 55623005 to 55632411 9406 + protein coding gene calcium modulating ligand
W10q17 13 112294569 to 55572541 -56722028 QTL weight 10 weeks QTL 17
W6q16 13 112294569 to 55572541 -56722028 QTL weight 6 weeks QTL 16
Tailq3 13 112294569 to 55572541 -56722028 QTL tail length QTL 3
Tailaq3 13 112294569 to 55572541 -56722028 QTL tail length adjusted QTL 3