MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:55545259-55596622

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tesq1	13	20431342 to 55572704	35141362		QTL	testis weight QTL 1
Fam193b	13	55539316 to 55571120	31804	-	protein coding gene	family with sequence similarity 193, member B
Gm46417	13	55547571 to 55548859	1288	+	lncRNA gene	predicted gene, 46417
Tssr122719	13	55568072 to 55568077	5	-	TSS region	transcription start site region 122719
Cpgi5679	13	55569755 to 55569928	173		CpG island	CpG island 5679
Cpgi5680	13	55570259 to 55571622	1363		CpG island	CpG island 5680
Tssr122720	13	55571087 to 55571108	21	-	TSS region	transcription start site region 122720
Tssr122721	13	55571118 to 55571123	5	-	TSS region	transcription start site region 122721
Gm31364	13	55571216 to 55574475	3259	+	lncRNA gene	predicted gene, 31364
D13Mit21	13	55572541 to 55572704	163		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 21
Cfbw5	13	55572545 to 55572704	159		QTL	cystic fibrosis body weight 5
D13Mit20	13	55572545 to 55572704	159		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 20
Cpgi5681	13	55592938 to 55593635	697		CpG island	CpG island 5681
Tmed9	13	55593135 to 55597697	4562	+	protein coding gene	transmembrane p24 trafficking protein 9
Tssr119967	13	55593137 to 55593177	40	+	TSS region	transcription start site region 119967
Tailaq3	13	112294569 to 55572541	-56722028		QTL	tail length adjusted QTL 3
Tailq3	13	112294569 to 55572541	-56722028		QTL	tail length QTL 3
W10q17	13	112294569 to 55572541	-56722028		QTL	weight 10 weeks QTL 17
W6q16	13	112294569 to 55572541	-56722028		QTL	weight 6 weeks QTL 16