Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:55325798-55475832

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mxd3 13 55325168 to 55329823 4655 - protein coding gene Max dimerization protein 3
Cpgi5665 13 55329246 to 55330658 1412 CpG island CpG island 5665
Tssr122684 13 55329723 to 55329776 53 - TSS region transcription start site region 122684
Tssr119941 13 55335943 to 55335993 50 + TSS region transcription start site region 119941
Lman2 13 55343833 to 55362783 18950 - protein coding gene lectin, mannose-binding 2
Tssr122685 13 55349939 to 55349943 4 - TSS region transcription start site region 122685
Cpgi5666 13 55361955 to 55363097 1142 CpG island CpG island 5666
Tssr122686 13 55362587 to 55362630 43 - TSS region transcription start site region 122686
Tssr122687 13 55362782 to 55362804 22 - TSS region transcription start site region 122687
Tssr122688 13 55362810 to 55362821 11 - TSS region transcription start site region 122688
Tssr122689 13 55362822 to 55362833 11 - TSS region transcription start site region 122689
Rgs14 13 55369732 to 55384687 14955 + protein coding gene regulator of G-protein signaling 14
Tssr119942 13 55369736 to 55369766 30 + TSS region transcription start site region 119942
Tssr119943 13 55369767 to 55369775 8 + TSS region transcription start site region 119943
Tssr119944 13 55369781 to 55369813 32 + TSS region transcription start site region 119944
Tssr122690 13 55375789 to 55375793 4 - TSS region transcription start site region 122690
Cpgi5667 13 55379162 to 55379723 561 CpG island CpG island 5667
Tssr119945 13 55379169 to 55379179 10 + TSS region transcription start site region 119945
Slc34a1 13 55399622 to 55414695 15073 + protein coding gene solute carrier family 34 (sodium phosphate), member 1
Tssr119946 13 55399685 to 55399700 15 + TSS region transcription start site region 119946
Tssr122691 13 55400798 to 55400832 34 - TSS region transcription start site region 122691
Tssr119947 13 55401097 to 55401102 5 + TSS region transcription start site region 119947
Tssr119948 13 55401182 to 55401201 19 + TSS region transcription start site region 119948
Tssr122692 13 55401187 to 55401197 10 - TSS region transcription start site region 122692
Tssr119949 13 55402913 to 55402923 10 + TSS region transcription start site region 119949
Tssr4079 13 55402936 to 55402946 10 + TSS region transcription start site region 4079
Tssr119950 13 55403036 to 55403057 21 + TSS region transcription start site region 119950
Tssr119951 13 55405081 to 55405086 5 + TSS region transcription start site region 119951
Tssr119952 13 55409028 to 55409045 17 + TSS region transcription start site region 119952
Tssr119953 13 55412038 to 55412050 12 + TSS region transcription start site region 119953
Tssr119954 13 55412270 to 55412279 9 + TSS region transcription start site region 119954
Tssr119955 13 55413184 to 55413191 7 + TSS region transcription start site region 119955
Tssr122693 13 55413474 to 55413480 6 - TSS region transcription start site region 122693
Tssr119956 13 55413568 to 55413575 7 + TSS region transcription start site region 119956
Tssr119957 13 55413582 to 55413592 10 + TSS region transcription start site region 119957
Pfn3 13 55414688 to 55415232 544 - protein coding gene profilin 3
Cpgi5668 13 55414723 to 55415341 618 CpG island CpG island 5668
BC038268 13 55414900 to 55415591 691 protein coding gene cDNA sequence BC038268
Tssr122694 13 55415216 to 55415251 35 - TSS region transcription start site region 122694
F12 13 55417958 to 55426793 8835 - protein coding gene coagulation factor XII (Hageman factor)
Cpgi5669 13 55418230 to 55418575 345 CpG island CpG island 5669
Cpgi5670 13 55420122 to 55421519 1397 CpG island CpG island 5670
Tssr119958 13 55422423 to 55422438 15 + TSS region transcription start site region 119958
Tssr122695 13 55426769 to 55426780 11 - TSS region transcription start site region 122695
Tssr122696 13 55426783 to 55426795 12 - TSS region transcription start site region 122696
Tssr122697 13 55426798 to 55426811 13 - TSS region transcription start site region 122697
Tssr122698 13 55432258 to 55432265 7 - TSS region transcription start site region 122698
Cpgi5671 13 55444504 to 55446101 1597 CpG island CpG island 5671
Tssr122699 13 55444874 to 55444896 22 - TSS region transcription start site region 122699
Grk6 13 55445072 to 55460927 15855 + protein coding gene G protein-coupled receptor kinase 6
Tssr119959 13 55445301 to 55445374 73 + TSS region transcription start site region 119959
Tssr122700 13 55447616 to 55447640 24 - TSS region transcription start site region 122700
Tssr4080 13 55449961 to 55449969 8 + TSS region transcription start site region 4080
Tssr4081 13 55449975 to 55450008 33 + TSS region transcription start site region 4081
Mir6943 13 55453106 to 55453171 65 + miRNA gene microRNA 6943
Cpgi5672 13 55463711 to 55465387 1676 CpG island CpG island 5672
Tssr119960 13 55464237 to 55464319 82 + TSS region transcription start site region 119960
Prr7 13 55464267 to 55473154 8887 + protein coding gene proline rich 7 (synaptic)
E130112B07Rik 13 55469207 to 55470397 1190 unclassified gene RIKEN cDNA E130112B07 gene
Cpgi5673 13 55471190 to 55473220 2030 CpG island CpG island 5673
Tssr119961 13 55471680 to 55471707 27 + TSS region transcription start site region 119961
Tssr119962 13 55471716 to 55471757 41 + TSS region transcription start site region 119962
Tssr119963 13 55471761 to 55471773 12 + TSS region transcription start site region 119963
Tssr119964 13 55472287 to 55472302 15 + TSS region transcription start site region 119964
Dbn1 13 55473428 to 55488110 14682 - protein coding gene drebrin 1
Tssr122701 13 55474514 to 55474527 13 - TSS region transcription start site region 122701