Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Tesq1 | 13 | 35141362 | QTL | testis weight QTL 1 | ||
Del(13Simc1-B4galt7)2Dja | 13 | 1106664 | chromosomal deletion | deletion, Chr 13, David J Adams 2 | ||
Nsd1 | 13 | 108543 | + | protein coding gene | nuclear receptor-binding SET-domain protein 1 | |
Tssr119929 | 13 | 3 | + | TSS region | transcription start site region 119929 | |
Tssr119930 | 13 | 3 | + | TSS region | transcription start site region 119930 | |
Tssr119931 | 13 | 48 | + | TSS region | transcription start site region 119931 | |
Tssr119932 | 13 | 2 | + | TSS region | transcription start site region 119932 | |
Gm47816 | 13 | 1176 | - | pseudogene | predicted gene, 47816 | |
Tssr119933 | 13 | 7 | + | TSS region | transcription start site region 119933 | |
D13Ertd376e | 13 | 209 | DNA segment | DNA segment, Chr 13, ERATO Doi 376, expressed | ||
Tssr119934 | 13 | 4 | + | TSS region | transcription start site region 119934 | |
Tssr119935 | 13 | 29 | + | TSS region | transcription start site region 119935 | |
Tssr119936 | 13 | 12 | + | TSS region | transcription start site region 119936 | |
Tssr119937 | 13 | 4 | + | TSS region | transcription start site region 119937 | |
Rab24 | 13 | 2203 | - | protein coding gene | RAB24, member RAS oncogene family | |
Cpgi5664 | 13 | 1309 | CpG island | CpG island 5664 | ||
Tssr122682 | 13 | 14 | - | TSS region | transcription start site region 122682 | |
Tssr122683 | 13 | 46 | - | TSS region | transcription start site region 122683 | |
Tssr119938 | 13 | 62 | + | TSS region | transcription start site region 119938 | |
Prelid1 | 13 | 3217 | + | protein coding gene | PRELI domain containing 1 | |
Tssr4076 | 13 | 8 | + | TSS region | transcription start site region 4076 | |
Tssr4077 | 13 | 12 | + | TSS region | transcription start site region 4077 | |
Tssr4078 | 13 | 12 | + | TSS region | transcription start site region 4078 | |
Tssr119939 | 13 | 20 | + | TSS region | transcription start site region 119939 | |
Tssr119940 | 13 | 15 | + | TSS region | transcription start site region 119940 | |
Mxd3 | 13 | 4655 | - | protein coding gene | Max dimerization protein 3 | |
Cpgi5665 | 13 | 1412 | CpG island | CpG island 5665 | ||
Tssr122684 | 13 | 53 | - | TSS region | transcription start site region 122684 | |
Tssr119941 | 13 | 50 | + | TSS region | transcription start site region 119941 | |
Lman2 | 13 | 18950 | - | protein coding gene | lectin, mannose-binding 2 | |
Tssr122685 | 13 | 4 | - | TSS region | transcription start site region 122685 | |
Cpgi5666 | 13 | 1142 | CpG island | CpG island 5666 | ||
Tssr122686 | 13 | 43 | - | TSS region | transcription start site region 122686 | |
Tssr122687 | 13 | 22 | - | TSS region | transcription start site region 122687 | |
Tssr122688 | 13 | 11 | - | TSS region | transcription start site region 122688 | |
Tssr122689 | 13 | 11 | - | TSS region | transcription start site region 122689 | |
Rgs14 | 13 | 14955 | + | protein coding gene | regulator of G-protein signaling 14 | |
Tssr119942 | 13 | 30 | + | TSS region | transcription start site region 119942 | |
Tssr119943 | 13 | 8 | + | TSS region | transcription start site region 119943 | |
Tssr119944 | 13 | 32 | + | TSS region | transcription start site region 119944 | |
Tssr122690 | 13 | 4 | - | TSS region | transcription start site region 122690 | |
Cpgi5667 | 13 | 561 | CpG island | CpG island 5667 | ||
Tssr119945 | 13 | 10 | + | TSS region | transcription start site region 119945 | |
Slc34a1 | 13 | 15073 | + | protein coding gene | solute carrier family 34 (sodium phosphate), member 1 | |
Tssr119946 | 13 | 15 | + | TSS region | transcription start site region 119946 | |
Tssr122691 | 13 | 34 | - | TSS region | transcription start site region 122691 | |
Tssr119947 | 13 | 5 | + | TSS region | transcription start site region 119947 | |
Tssr119948 | 13 | 19 | + | TSS region | transcription start site region 119948 | |
Tssr122692 | 13 | 10 | - | TSS region | transcription start site region 122692 | |
Tssr119949 | 13 | 10 | + | TSS region | transcription start site region 119949 | |
Tssr4079 | 13 | 10 | + | TSS region | transcription start site region 4079 | |
Tssr119950 | 13 | 21 | + | TSS region | transcription start site region 119950 | |
Tssr119951 | 13 | 5 | + | TSS region | transcription start site region 119951 | |
Tssr119952 | 13 | 17 | + | TSS region | transcription start site region 119952 | |
Tssr119953 | 13 | 12 | + | TSS region | transcription start site region 119953 | |
Tssr119954 | 13 | 9 | + | TSS region | transcription start site region 119954 | |
Tssr119955 | 13 | 7 | + | TSS region | transcription start site region 119955 | |
Tssr122693 | 13 | 6 | - | TSS region | transcription start site region 122693 | |
Tssr119956 | 13 | 7 | + | TSS region | transcription start site region 119956 | |
Tssr119957 | 13 | 10 | + | TSS region | transcription start site region 119957 | |
Pfn3 | 13 | 544 | - | protein coding gene | profilin 3 | |
Cpgi5668 | 13 | 618 | CpG island | CpG island 5668 | ||
BC038268 | 13 | 691 | protein coding gene | cDNA sequence BC038268 | ||
Tssr122694 | 13 | 35 | - | TSS region | transcription start site region 122694 | |
F12 | 13 | 8835 | - | protein coding gene | coagulation factor XII (Hageman factor) | |
Cpgi5669 | 13 | 345 | CpG island | CpG island 5669 | ||
Cpgi5670 | 13 | 1397 | CpG island | CpG island 5670 | ||
Tssr119958 | 13 | 15 | + | TSS region | transcription start site region 119958 | |
Tssr122695 | 13 | 11 | - | TSS region | transcription start site region 122695 | |
Tssr122696 | 13 | 12 | - | TSS region | transcription start site region 122696 | |
Tssr122697 | 13 | 13 | - | TSS region | transcription start site region 122697 | |
Tssr122698 | 13 | 7 | - | TSS region | transcription start site region 122698 | |
Cpgi5671 | 13 | 1597 | CpG island | CpG island 5671 | ||
Tssr122699 | 13 | 22 | - | TSS region | transcription start site region 122699 | |
Grk6 | 13 | 15855 | + | protein coding gene | G protein-coupled receptor kinase 6 | |
Tssr119959 | 13 | 73 | + | TSS region | transcription start site region 119959 | |
Tssr122700 | 13 | 24 | - | TSS region | transcription start site region 122700 | |
Tssr4080 | 13 | 8 | + | TSS region | transcription start site region 4080 | |
Tssr4081 | 13 | 33 | + | TSS region | transcription start site region 4081 | |
Mir6943 | 13 | 65 | + | miRNA gene | microRNA 6943 | |
Cpgi5672 | 13 | 1676 | CpG island | CpG island 5672 | ||
Tssr119960 | 13 | 82 | + | TSS region | transcription start site region 119960 | |
Prr7 | 13 | 8887 | + | protein coding gene | proline rich 7 (synaptic) | |
E130112B07Rik | 13 | 1190 | unclassified gene | RIKEN cDNA E130112B07 gene | ||
Cpgi5673 | 13 | 2030 | CpG island | CpG island 5673 | ||
Tssr119961 | 13 | 27 | + | TSS region | transcription start site region 119961 | |
Tssr119962 | 13 | 41 | + | TSS region | transcription start site region 119962 | |
Tssr119963 | 13 | 12 | + | TSS region | transcription start site region 119963 | |
Tssr119964 | 13 | 15 | + | TSS region | transcription start site region 119964 | |
Dbn1 | 13 | 14682 | - | protein coding gene | drebrin 1 | |
Tssr122701 | 13 | 13 | - | TSS region | transcription start site region 122701 | |
Tssr122702 | 13 | 23 | - | TSS region | transcription start site region 122702 | |
Tssr119965 | 13 | 11 | + | TSS region | transcription start site region 119965 | |
Mir6944 | 13 | 95 | - | miRNA gene | microRNA 6944 | |
Tssr119966 | 13 | 3 | + | TSS region | transcription start site region 119966 | |
Tssr122703 | 13 | 21 | - | TSS region | transcription start site region 122703 | |
Cpgi5674 | 13 | 212 | CpG island | CpG island 5674 | ||
Tssr122704 | 13 | 11 | - | TSS region | transcription start site region 122704 | |
Tssr122705 | 13 | 53 | - | TSS region | transcription start site region 122705 | |
Cpgi5675 | 13 | 1397 | CpG island | CpG island 5675 | ||
Tssr122706 | 13 | 5 | - | TSS region | transcription start site region 122706 | |
Tssr122707 | 13 | 51 | - | TSS region | transcription start site region 122707 | |
Pdlim7 | 13 | 15986 | - | protein coding gene | PDZ and LIM domain 7 | |
Mir6945 | 13 | 67 | - | miRNA gene | microRNA 6945 | |
Tssr122708 | 13 | 27 | - | TSS region | transcription start site region 122708 | |
Tssr122709 | 13 | 13 | - | TSS region | transcription start site region 122709 | |
Tssr122710 | 13 | 12 | - | TSS region | transcription start site region 122710 | |
Cpgi5676 | 13 | 1296 | CpG island | CpG island 5676 | ||
Tssr122711 | 13 | 16 | - | TSS region | transcription start site region 122711 | |
Dok3 | 13 | 6065 | - | protein coding gene | docking protein 3 | |
Cpgi5677 | 13 | 293 | CpG island | CpG island 5677 | ||
Tssr122712 | 13 | 4 | - | TSS region | transcription start site region 122712 | |
Tssr122713 | 13 | 50 | - | TSS region | transcription start site region 122713 | |
Tssr122714 | 13 | 18 | - | TSS region | transcription start site region 122714 | |
Tssr122715 | 13 | 27 | - | TSS region | transcription start site region 122715 | |
Tssr122716 | 13 | 5 | - | TSS region | transcription start site region 122716 | |
Ddx41 | 13 | 6248 | - | protein coding gene | DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 | |
Cpgi5678 | 13 | 1114 | CpG island | CpG island 5678 | ||
Gm46416 | 13 | 629 | + | antisense lncRNA gene | predicted gene, 46416 | |
Tssr122717 | 13 | 39 | - | TSS region | transcription start site region 122717 | |
Tssr122718 | 13 | 43 | - | TSS region | transcription start site region 122718 | |
Fam193b | 13 | 31804 | - | protein coding gene | family with sequence similarity 193, member B | |
Gm46417 | 13 | 1288 | + | lncRNA gene | predicted gene, 46417 | |
Tssr122719 | 13 | 5 | - | TSS region | transcription start site region 122719 | |
Cpgi5679 | 13 | 173 | CpG island | CpG island 5679 | ||
Cpgi5680 | 13 | 1363 | CpG island | CpG island 5680 | ||
Tssr122720 | 13 | 21 | - | TSS region | transcription start site region 122720 | |
Tssr122721 | 13 | 5 | - | TSS region | transcription start site region 122721 | |
Gm31364 | 13 | 3259 | + | lncRNA gene | predicted gene, 31364 | |
D13Mit21 | 13 | 163 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 21 | ||
Cfbw5 | 13 | 159 | QTL | cystic fibrosis body weight 5 | ||
D13Mit20 | 13 | 159 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 20 | ||
Cpgi5681 | 13 | 697 | CpG island | CpG island 5681 | ||
Tmed9 | 13 | 4562 | + | protein coding gene | transmembrane p24 trafficking protein 9 | |
Tssr119967 | 13 | 40 | + | TSS region | transcription start site region 119967 | |
Tssr119968 | 13 | 9 | + | TSS region | transcription start site region 119968 | |
Cpgi5682 | 13 | 550 | CpG island | CpG island 5682 | ||
B4galt7 | 13 | 10547 | + | protein coding gene | xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) | |
Tssr119969 | 13 | 80 | + | TSS region | transcription start site region 119969 | |
Gm15911 | 13 | 2601 | - | antisense lncRNA gene | predicted gene 15911 | |
Tssr119970 | 13 | 7 | + | TSS region | transcription start site region 119970 | |
Tssr119971 | 13 | 4 | + | TSS region | transcription start site region 119971 | |
Cpgi5683 | 13 | 899 | CpG island | CpG island 5683 | ||
Tssr119972 | 13 | 85 | + | TSS region | transcription start site region 119972 | |
Caml | 13 | 9406 | + | protein coding gene | calcium modulating ligand | |
Cpgi5684 | 13 | 900 | CpG island | CpG island 5684 | ||
Tssr119973 | 13 | 34 | + | TSS region | transcription start site region 119973 | |
Ddx46 | 13 | 46229 | + | protein coding gene | DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 | |
Tssr119974 | 13 | 27 | + | TSS region | transcription start site region 119974 | |
Tssr119975 | 13 | 20 | + | TSS region | transcription start site region 119975 | |
Tssr119976 | 13 | 11 | + | TSS region | transcription start site region 119976 | |
Tssr119977 | 13 | 17 | + | TSS region | transcription start site region 119977 | |
Tssr122722 | 13 | 35 | - | TSS region | transcription start site region 122722 | |
Tssr119978 | 13 | 42 | + | TSS region | transcription start site region 119978 | |
Tssr119979 | 13 | 25 | + | TSS region | transcription start site region 119979 | |
Cpgi5685 | 13 | 999 | CpG island | CpG island 5685 | ||
Tssr119980 | 13 | 69 | + | TSS region | transcription start site region 119980 | |
B230219D22Rik | 13 | 10376 | + | protein coding gene | RIKEN cDNA B230219D22 gene | |
Cpgi5686 | 13 | 761 | CpG island | CpG island 5686 | ||
Tssr119981 | 13 | 18 | + | TSS region | transcription start site region 119981 | |
Txndc15 | 13 | 11577 | + | protein coding gene | thioredoxin domain containing 15 | |
Tssr119982 | 13 | 94 | + | TSS region | transcription start site region 119982 | |
Tssr119983 | 13 | 11 | + | TSS region | transcription start site region 119983 | |
Cpgi5687 | 13 | 976 | CpG island | CpG island 5687 | ||
Tssr119984 | 13 | 37 | + | TSS region | transcription start site region 119984 | |
Pcbd2 | 13 | 49462 | + | protein coding gene | pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 | |
Tssr122723 | 13 | 1 | - | TSS region | transcription start site region 122723 | |
4930451E10Rik | 13 | 9050 | - | antisense lncRNA gene | RIKEN cDNA 4930451E10 gene | |
Tssr122724 | 13 | 10 | - | TSS region | transcription start site region 122724 | |
Tssr122725 | 13 | 8 | - | TSS region | transcription start site region 122725 | |
Tssr119985 | 13 | 6 | + | TSS region | transcription start site region 119985 | |
Catsper3 | 13 | 24430 | + | protein coding gene | cation channel, sperm associated 3 | |
Tssr119986 | 13 | 25 | + | TSS region | transcription start site region 119986 | |
Tssr119987 | 13 | 5 | + | TSS region | transcription start site region 119987 | |
Cpgi5688 | 13 | 1743 | CpG island | CpG island 5688 | ||
Pitx1 | 13 | 11141 | - | protein coding gene | paired-like homeodomain transcription factor 1 | |
Cpgi5689 | 13 | 667 | CpG island | CpG island 5689 | ||
Cpgi5690 | 13 | 2040 | CpG island | CpG island 5690 | ||
Tssr122726 | 13 | 31 | - | TSS region | transcription start site region 122726 | |
Tssr122727 | 13 | 17 | - | TSS region | transcription start site region 122727 | |
Tssr122728 | 13 | 17 | - | TSS region | transcription start site region 122728 | |
Gm28760 | 13 | 735 | - | lincRNA gene | predicted gene 28760 | |
Cpgi5691 | 13 | 1134 | CpG island | CpG island 5691 | ||
Tssr122729 | 13 | 28 | - | TSS region | transcription start site region 122729 | |
Tssr122730 | 13 | 49 | - | TSS region | transcription start site region 122730 | |
Cpgi5692 | 13 | 364 | CpG island | CpG island 5692 | ||
Tssr119988 | 13 | 14 | + | TSS region | transcription start site region 119988 | |
Gm31542 | 13 | 5493 | - | lncRNA gene | predicted gene, 31542 | |
Tssr122731 | 13 | 1 | - | TSS region | transcription start site region 122731 | |
Tssr119989 | 13 | 8 | + | TSS region | transcription start site region 119989 | |
Tssr119990 | 13 | 14 | + | TSS region | transcription start site region 119990 | |
Tssr119991 | 13 | 4 | + | TSS region | transcription start site region 119991 | |
W6q16 | 13 | -56722028 | QTL | weight 6 weeks QTL 16 | ||
Tailq3 | 13 | -56722028 | QTL | tail length QTL 3 | ||
Tailaq3 | 13 | -56722028 | QTL | tail length adjusted QTL 3 | ||
W10q17 | 13 | -56722028 | QTL | weight 10 weeks QTL 17 |