Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:55220256-55360285

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nsd1 13 55209782 to 55318325 108543 + protein coding gene nuclear receptor-binding SET-domain protein 1
Tssr119928 13 55220655 to 55220668 13 + TSS region transcription start site region 119928
Tssr119929 13 55223137 to 55223140 3 + TSS region transcription start site region 119929
Tssr119930 13 55242924 to 55242927 3 + TSS region transcription start site region 119930
Tssr119931 13 55247905 to 55247953 48 + TSS region transcription start site region 119931
Tssr119932 13 55253119 to 55253121 2 + TSS region transcription start site region 119932
Gm47816 13 55253225 to 55254401 1176 - pseudogene predicted gene, 47816
Tssr119933 13 55265198 to 55265205 7 + TSS region transcription start site region 119933
D13Ertd376e 13 55270911 to 55271120 209 DNA segment DNA segment, Chr 13, ERATO Doi 376, expressed
Tssr119934 13 55272944 to 55272948 4 + TSS region transcription start site region 119934
Tssr119935 13 55290256 to 55290285 29 + TSS region transcription start site region 119935
Tssr119936 13 55315529 to 55315541 12 + TSS region transcription start site region 119936
Tssr119937 13 55316865 to 55316869 4 + TSS region transcription start site region 119937
Rab24 13 55319743 to 55321946 2203 - protein coding gene RAB24, member RAS oncogene family
Cpgi5664 13 55321294 to 55322603 1309 CpG island CpG island 5664
Tssr122682 13 55321897 to 55321911 14 - TSS region transcription start site region 122682
Tssr122683 13 55321928 to 55321974 46 - TSS region transcription start site region 122683
Tssr119938 13 55321991 to 55322053 62 + TSS region transcription start site region 119938
Prelid1 13 55322055 to 55325272 3217 + protein coding gene PRELI domain containing 1
Tssr4076 13 55322084 to 55322092 8 + TSS region transcription start site region 4076
Tssr4077 13 55322138 to 55322150 12 + TSS region transcription start site region 4077
Tssr4078 13 55322163 to 55322175 12 + TSS region transcription start site region 4078
Tssr119939 13 55322744 to 55322764 20 + TSS region transcription start site region 119939
Tssr119940 13 55322883 to 55322898 15 + TSS region transcription start site region 119940
Mxd3 13 55325168 to 55329823 4655 - protein coding gene Max dimerization protein 3
Cpgi5665 13 55329246 to 55330658 1412 CpG island CpG island 5665
Tssr122684 13 55329723 to 55329776 53 - TSS region transcription start site region 122684
Tssr119941 13 55335943 to 55335993 50 + TSS region transcription start site region 119941
Lman2 13 55343833 to 55362783 18950 - protein coding gene lectin, mannose-binding 2
Tssr122685 13 55349939 to 55349943 4 - TSS region transcription start site region 122685