Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 13:55161519-55261561

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31 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fgfr4 13 55152818 to 55168759 15941 + protein coding gene fibroblast growth factor receptor 4
Cpgi5660 13 55161301 to 55161805 504 CpG island CpG island 5660
Cpgi5661 13 55171912 to 55172106 194 CpG island CpG island 5661
Tssr122677 13 55182558 to 55182565 7 - TSS region transcription start site region 122677
3930401B19Rik 13 55184771 to 55186647 1876 + lncRNA gene RIKEN cDNA 3930401B19 gene
Cpgi5662 13 55190076 to 55190667 591 CpG island CpG island 5662
Tssr122678 13 55190186 to 55190236 50 - TSS region transcription start site region 122678
Tssr119915 13 55190417 to 55190440 23 + TSS region transcription start site region 119915
Tssr119916 13 55190450 to 55190465 15 + TSS region transcription start site region 119916
Cpgi5663 13 55209719 to 55213014 3295 CpG island CpG island 5663
Tssr119917 13 55209776 to 55209788 12 + TSS region transcription start site region 119917
Nsd1 13 55209782 to 55318325 108543 + protein coding gene nuclear receptor-binding SET-domain protein 1
Tssr119918 13 55209805 to 55209812 7 + TSS region transcription start site region 119918
Tssr119919 13 55210315 to 55210357 42 + TSS region transcription start site region 119919
Tssr119920 13 55210400 to 55210470 70 + TSS region transcription start site region 119920
Tssr119921 13 55210924 to 55210958 34 + TSS region transcription start site region 119921
Tssr122679 13 55211354 to 55211370 16 - TSS region transcription start site region 122679
Tssr119922 13 55211519 to 55211561 42 + TSS region transcription start site region 119922
Tssr122680 13 55211543 to 55211554 11 - TSS region transcription start site region 122680
Tssr122681 13 55211557 to 55211571 14 - TSS region transcription start site region 122681
Tssr119923 13 55211678 to 55211730 52 + TSS region transcription start site region 119923
Tssr119924 13 55211785 to 55211861 76 + TSS region transcription start site region 119924
Tssr119925 13 55211888 to 55211921 33 + TSS region transcription start site region 119925
Tssr119926 13 55212053 to 55212086 33 + TSS region transcription start site region 119926
Tssr119927 13 55212719 to 55212751 32 + TSS region transcription start site region 119927
Tssr119928 13 55220655 to 55220668 13 + TSS region transcription start site region 119928
Tssr119929 13 55223137 to 55223140 3 + TSS region transcription start site region 119929
Tssr119930 13 55242924 to 55242927 3 + TSS region transcription start site region 119930
Tssr119931 13 55247905 to 55247953 48 + TSS region transcription start site region 119931
Tssr119932 13 55253119 to 55253121 2 + TSS region transcription start site region 119932
Gm47816 13 55253225 to 55254401 1176 - pseudogene predicted gene, 47816