Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:54905579-55006589

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr119904	13	54913226 to 54913227	1	+	TSS region	transcription start site region 119904
Tssr119905	13	54913229 to 54913240	11	+	TSS region	transcription start site region 119905
5330429C05Rik	13	54913235 to 54914479	1244	+	lincRNA gene	RIKEN cDNA 5330429C05 gene
Tssr119906	13	54913249 to 54913250	1	+	TSS region	transcription start site region 119906
4930526F13Rik	13	54927748 to 54930753	3005	-	lincRNA gene	RIKEN cDNA 4930526F13 gene
Tssr122657	13	54930199 to 54930213	14	-	TSS region	transcription start site region 122657
Tssr122658	13	54930229 to 54930246	17	-	TSS region	transcription start site region 122658
Tssr122659	13	54930257 to 54930265	8	-	TSS region	transcription start site region 122659
Gm31313	13	54933420 to 54949336	15916	-	lncRNA gene	predicted gene, 31313
Cpgi5654	13	54948427 to 54950370	1943		CpG island	CpG island 5654
Tssr119907	13	54949363 to 54949386	23	+	TSS region	transcription start site region 119907
Tssr119908	13	54949388 to 54949481	93	+	TSS region	transcription start site region 119908
Unc5a	13	54949411 to 55006018	56607	+	protein coding gene	unc-5 netrin receptor A
Cpgi5655	13	54955579 to 54956589	1010		CpG island	CpG island 5655
Tssr4075	13	54991434 to 54991435	1	+	TSS region	transcription start site region 4075
Tssr119909	13	55003213 to 55003228	15	+	TSS region	transcription start site region 119909
Tssr119910	13	55005985 to 55006015	30	+	TSS region	transcription start site region 119910
Hk3	13	55005985 to 55021385	15400	-	protein coding gene	hexokinase 3