MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:54439309-54569326

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Thoc3	13	54458837 to 54468840	10003	-	protein coding gene	THO complex 3
Cpgi5637	13	54468255 to 54469015	760		CpG island	CpG island 5637
Tssr122609	13	54468805 to 54468862	57	-	TSS region	transcription start site region 122609
D13Mit54	13	54478184 to 54478304	120		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 54
Cpgi5638	13	54481397 to 54481611	214		CpG island	CpG island 5638
Gm2830	13	54499705 to 54500089	384	-	pseudogene	predicted gene 2830
Cpgi5639	13	54503257 to 54504575	1318		CpG island	CpG island 5639
Tssr119870	13	54503762 to 54503769	7	+	TSS region	transcription start site region 119870
Del(13Simc1-B4galt7)2Dja	13	54503779 to 55610443	1106664		chromosomal deletion	deletion, Chr 13, David J Adams 2
Simc1	13	54503779 to 54551290	47511	+	protein coding gene	SUMO-interacting motifs containing 1
Tssr119871	13	54503786 to 54503800	14	+	TSS region	transcription start site region 119871
Tssr122610	13	54504309 to 54504326	17	-	TSS region	transcription start site region 122610
Tssr119872	13	54517504 to 54517508	4	+	TSS region	transcription start site region 119872
4833439L19Rik	13	54551218 to 54565382	14164	-	protein coding gene	RIKEN cDNA 4833439L19 gene
Tssr122611	13	54551907 to 54551939	32	-	TSS region	transcription start site region 122611
Cpgi5640	13	54564663 to 54565548	885		CpG island	CpG island 5640
Tssr122612	13	54565299 to 54565362	63	-	TSS region	transcription start site region 122612
Tssr122613	13	54565368 to 54565386	18	-	TSS region	transcription start site region 122613