Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Tesq1 | 13 | 35141362 | QTL | testis weight QTL 1 | ||
Tssr122608 | 13 | 22 | - | TSS region | transcription start site region 122608 | |
Gm22668 | 13 | 259 | - | unclassified non-coding RNA gene | predicted gene, 22668 | |
Thoc3 | 13 | 10003 | - | protein coding gene | THO complex 3 | |
Cpgi5637 | 13 | 760 | CpG island | CpG island 5637 | ||
Tssr122609 | 13 | 57 | - | TSS region | transcription start site region 122609 | |
D13Mit54 | 13 | 120 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 54 | ||
Cpgi5638 | 13 | 214 | CpG island | CpG island 5638 | ||
Gm2830 | 13 | 384 | - | pseudogene | predicted gene 2830 | |
Cpgi5639 | 13 | 1318 | CpG island | CpG island 5639 | ||
Tssr119870 | 13 | 7 | + | TSS region | transcription start site region 119870 | |
Simc1 | 13 | 47511 | + | protein coding gene | SUMO-interacting motifs containing 1 | |
Del(13Simc1-B4galt7)2Dja | 13 | 1106664 | chromosomal deletion | deletion, Chr 13, David J Adams 2 | ||
Tssr119871 | 13 | 14 | + | TSS region | transcription start site region 119871 | |
Tssr122610 | 13 | 17 | - | TSS region | transcription start site region 122610 | |
Tssr119872 | 13 | 4 | + | TSS region | transcription start site region 119872 | |
4833439L19Rik | 13 | 14164 | - | protein coding gene | RIKEN cDNA 4833439L19 gene | |
Tssr122611 | 13 | 32 | - | TSS region | transcription start site region 122611 | |
Cpgi5640 | 13 | 885 | CpG island | CpG island 5640 | ||
Tssr122612 | 13 | 63 | - | TSS region | transcription start site region 122612 | |
Tssr122613 | 13 | 18 | - | TSS region | transcription start site region 122613 | |
Tssr119873 | 13 | 49 | + | TSS region | transcription start site region 119873 | |
Cpgi5641 | 13 | 1031 | CpG island | CpG island 5641 | ||
Tssr119874 | 13 | 9 | + | TSS region | transcription start site region 119874 | |
Arl10 | 13 | 6113 | + | protein coding gene | ADP-ribosylation factor-like 10 | |
Tssr119875 | 13 | 73 | + | TSS region | transcription start site region 119875 | |
Tssr119876 | 13 | 16 | + | TSS region | transcription start site region 119876 | |
Gm24195 | 13 | 136 | + | miRNA gene | predicted gene, 24195 | |
Tssr119877 | 13 | 44 | + | TSS region | transcription start site region 119877 | |
Tssr119878 | 13 | 6 | + | TSS region | transcription start site region 119878 | |
Nop16 | 13 | 5883 | - | protein coding gene | NOP16 nucleolar protein | |
Tssr122614 | 13 | 5 | - | TSS region | transcription start site region 122614 | |
Cpgi5642 | 13 | 1461 | CpG island | CpG island 5642 | ||
Tssr119879 | 13 | 26 | + | TSS region | transcription start site region 119879 | |
Tssr122615 | 13 | 21 | - | TSS region | transcription start site region 122615 | |
Tssr122616 | 13 | 42 | - | TSS region | transcription start site region 122616 | |
Tssr119880 | 13 | 14 | + | TSS region | transcription start site region 119880 | |
Tssr119881 | 13 | 46 | + | TSS region | transcription start site region 119881 | |
Higd2a | 13 | 916 | + | protein coding gene | HIG1 domain family, member 2A | |
Tssr119882 | 13 | 16 | + | TSS region | transcription start site region 119882 | |
Cltb | 13 | 18466 | - | protein coding gene | clathrin, light polypeptide (Lcb) | |
Tssr122617 | 13 | 11 | - | TSS region | transcription start site region 122617 | |
Cpgi5643 | 13 | 493 | CpG island | CpG island 5643 | ||
Tssr122618 | 13 | 11 | - | TSS region | transcription start site region 122618 | |
Tssr122619 | 13 | 17 | - | TSS region | transcription start site region 122619 | |
Cpgi5644 | 13 | 1356 | CpG island | CpG island 5644 | ||
Tssr122620 | 13 | 23 | - | TSS region | transcription start site region 122620 | |
Tssr122621 | 13 | 17 | - | TSS region | transcription start site region 122621 | |
Tssr122622 | 13 | 55 | - | TSS region | transcription start site region 122622 | |
Tssr122623 | 13 | 13 | - | TSS region | transcription start site region 122623 | |
Cpgi5645 | 13 | 900 | CpG island | CpG island 5645 | ||
Tssr119883 | 13 | 13 | + | TSS region | transcription start site region 119883 | |
Faf2 | 13 | 42279 | + | protein coding gene | Fas associated factor family member 2 | |
Tssr119884 | 13 | 40 | + | TSS region | transcription start site region 119884 | |
Tssr119885 | 13 | 4 | + | TSS region | transcription start site region 119885 | |
D13Mit96 | 13 | 106 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 96 | ||
D13Mit96.1 | 13 | 208 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 96.1 | ||
Rn4.5s-ps3 | 13 | 93 | - | pseudogene | 4.5s RNA, pseudogene 3 | |
Rnf44 | 13 | 14508 | - | protein coding gene | ring finger protein 44 | |
Tssr122624 | 13 | 28 | - | TSS region | transcription start site region 122624 | |
Tssr122625 | 13 | 32 | - | TSS region | transcription start site region 122625 | |
Tssr122626 | 13 | 32 | - | TSS region | transcription start site region 122626 | |
Cpgi5646 | 13 | 1563 | CpG island | CpG island 5646 | ||
Tssr122627 | 13 | 16 | - | TSS region | transcription start site region 122627 | |
Tssr119886 | 13 | 14 | + | TSS region | transcription start site region 119886 | |
Tssr122628 | 13 | 20 | - | TSS region | transcription start site region 122628 | |
Tssr122629 | 13 | 44 | - | TSS region | transcription start site region 122629 | |
Tssr122630 | 13 | 113 | - | TSS region | transcription start site region 122630 | |
Tssr119887 | 13 | 15 | + | TSS region | transcription start site region 119887 | |
Tssr119888 | 13 | 22 | + | TSS region | transcription start site region 119888 | |
Tssr122631 | 13 | 28 | - | TSS region | transcription start site region 122631 | |
Tssr122632 | 13 | 46 | - | TSS region | transcription start site region 122632 | |
Tssr122633 | 13 | 27 | - | TSS region | transcription start site region 122633 | |
Tssr122634 | 13 | 17 | - | TSS region | transcription start site region 122634 | |
Tssr122635 | 13 | 20 | - | TSS region | transcription start site region 122635 | |
Tssr122636 | 13 | 7 | - | TSS region | transcription start site region 122636 | |
Cpgi5647 | 13 | 1365 | CpG island | CpG island 5647 | ||
Tssr122637 | 13 | 94 | - | TSS region | transcription start site region 122637 | |
Tssr119889 | 13 | 11 | + | TSS region | transcription start site region 119889 | |
Tssr119890 | 13 | 22 | + | TSS region | transcription start site region 119890 | |
Cdhr2 | 13 | 35199 | + | protein coding gene | cadherin-related family member 2 | |
Tssr119891 | 13 | 9 | + | TSS region | transcription start site region 119891 | |
Tssr119892 | 13 | 12 | + | TSS region | transcription start site region 119892 | |
Tssr119893 | 13 | 16 | + | TSS region | transcription start site region 119893 | |
Tssr119894 | 13 | 11 | + | TSS region | transcription start site region 119894 | |
Tssr119895 | 13 | 3 | + | TSS region | transcription start site region 119895 | |
Tssr119896 | 13 | 10 | + | TSS region | transcription start site region 119896 | |
Tssr119897 | 13 | 15 | + | TSS region | transcription start site region 119897 | |
Tssr4074 | 13 | 9 | + | TSS region | transcription start site region 4074 | |
Tssr119898 | 13 | 24 | + | TSS region | transcription start site region 119898 | |
Gprin1 | 13 | 13203 | - | protein coding gene | G protein-regulated inducer of neurite outgrowth 1 | |
Cpgi5648 | 13 | 1876 | CpG island | CpG island 5648 | ||
9530001D17Rik | 13 | 380 | unclassified gene | RIKEN cDNA 9530001D17 gene | ||
Cpgi5649 | 13 | 1434 | CpG island | CpG island 5649 | ||
Tssr122638 | 13 | 12 | - | TSS region | transcription start site region 122638 | |
Tssr122639 | 13 | 70 | - | TSS region | transcription start site region 122639 | |
Tssr122640 | 13 | 44 | - | TSS region | transcription start site region 122640 | |
Tssr122641 | 13 | 12 | - | TSS region | transcription start site region 122641 | |
Cpgi5650 | 13 | 1083 | CpG island | CpG island 5650 | ||
Sncb | 13 | 7735 | - | protein coding gene | synuclein, beta | |
Tssr122642 | 13 | 10 | - | TSS region | transcription start site region 122642 | |
Tssr122643 | 13 | 8 | - | TSS region | transcription start site region 122643 | |
Tssr122644 | 13 | 29 | - | TSS region | transcription start site region 122644 | |
Tssr122645 | 13 | 8 | - | TSS region | transcription start site region 122645 | |
Tssr122646 | 13 | 11 | - | TSS region | transcription start site region 122646 | |
Tssr122647 | 13 | 38 | - | TSS region | transcription start site region 122647 | |
Tssr122648 | 13 | 14 | - | TSS region | transcription start site region 122648 | |
Tssr122649 | 13 | 16 | - | TSS region | transcription start site region 122649 | |
Tssr122650 | 13 | 23 | - | TSS region | transcription start site region 122650 | |
Tssr122651 | 13 | 22 | - | TSS region | transcription start site region 122651 | |
Tssr122652 | 13 | 19 | - | TSS region | transcription start site region 122652 | |
Cpgi5651 | 13 | 1074 | CpG island | CpG island 5651 | ||
Tssr122653 | 13 | 16 | - | TSS region | transcription start site region 122653 | |
Tssr122654 | 13 | 59 | - | TSS region | transcription start site region 122654 | |
Tssr122655 | 13 | 3 | - | TSS region | transcription start site region 122655 | |
Tssr122656 | 13 | 19 | - | TSS region | transcription start site region 122656 | |
Gm16249 | 13 | 5577 | - | antisense lncRNA gene | predicted gene 16249 | |
Tssr119899 | 13 | 5 | + | TSS region | transcription start site region 119899 | |
Eif4e1b | 13 | 4461 | + | protein coding gene | eukaryotic translation initiation factor 4E family member 1B | |
Cpgi5652 | 13 | 1134 | CpG island | CpG island 5652 | ||
Tspan17 | 13 | 7399 | + | protein coding gene | tetraspanin 17 | |
Tssr119900 | 13 | 71 | + | TSS region | transcription start site region 119900 | |
Tssr119901 | 13 | 9 | + | TSS region | transcription start site region 119901 | |
Tssr119902 | 13 | 5 | + | TSS region | transcription start site region 119902 | |
Gm16250 | 13 | 255 | - | pseudogene | predicted gene 16250 | |
Gm40959 | 13 | 16734 | - | lncRNA gene | predicted gene, 40959 | |
Cpgi5653 | 13 | 464 | CpG island | CpG island 5653 | ||
Gm31188 | 13 | 2463 | + | lncRNA gene | predicted gene, 31188 | |
Tssr119903 | 13 | 25 | + | TSS region | transcription start site region 119903 | |
Gm29431 | 13 | 543 | + | lincRNA gene | predicted gene 29431 | |
Tssr119904 | 13 | 1 | + | TSS region | transcription start site region 119904 | |
Tssr119905 | 13 | 11 | + | TSS region | transcription start site region 119905 | |
5330429C05Rik | 13 | 1244 | + | lincRNA gene | RIKEN cDNA 5330429C05 gene | |
Tssr119906 | 13 | 1 | + | TSS region | transcription start site region 119906 | |
4930526F13Rik | 13 | 3005 | - | lincRNA gene | RIKEN cDNA 4930526F13 gene | |
Tssr122657 | 13 | 14 | - | TSS region | transcription start site region 122657 | |
Tssr122658 | 13 | 17 | - | TSS region | transcription start site region 122658 | |
Tssr122659 | 13 | 8 | - | TSS region | transcription start site region 122659 | |
Gm31313 | 13 | 15916 | - | lncRNA gene | predicted gene, 31313 | |
Cpgi5654 | 13 | 1943 | CpG island | CpG island 5654 | ||
Tssr119907 | 13 | 23 | + | TSS region | transcription start site region 119907 | |
Tssr119908 | 13 | 93 | + | TSS region | transcription start site region 119908 | |
Unc5a | 13 | 56607 | + | protein coding gene | unc-5 netrin receptor A | |
Cpgi5655 | 13 | 1010 | CpG island | CpG island 5655 | ||
Tssr4075 | 13 | 1 | + | TSS region | transcription start site region 4075 | |
Tssr119909 | 13 | 15 | + | TSS region | transcription start site region 119909 | |
Tssr119910 | 13 | 30 | + | TSS region | transcription start site region 119910 | |
Hk3 | 13 | 15400 | - | protein coding gene | hexokinase 3 | |
Tssr122660 | 13 | 9 | - | TSS region | transcription start site region 122660 | |
Tssr119911 | 13 | 17 | + | TSS region | transcription start site region 119911 | |
Tssr122661 | 13 | 11 | - | TSS region | transcription start site region 122661 | |
Tssr122662 | 13 | 11 | - | TSS region | transcription start site region 122662 | |
Tssr122663 | 13 | 13 | - | TSS region | transcription start site region 122663 | |
Tssr122664 | 13 | 14 | - | TSS region | transcription start site region 122664 | |
Tssr122665 | 13 | 14 | - | TSS region | transcription start site region 122665 | |
Tssr122666 | 13 | 10 | - | TSS region | transcription start site region 122666 | |
Tssr122667 | 13 | 9 | - | TSS region | transcription start site region 122667 | |
Tssr122668 | 13 | 43 | - | TSS region | transcription start site region 122668 | |
Tssr122669 | 13 | 16 | - | TSS region | transcription start site region 122669 | |
Tssr122670 | 13 | 13 | - | TSS region | transcription start site region 122670 | |
Tssr122671 | 13 | 7 | - | TSS region | transcription start site region 122671 | |
Tssr122672 | 13 | 12 | - | TSS region | transcription start site region 122672 | |
Tssr122673 | 13 | 12 | - | TSS region | transcription start site region 122673 | |
Uimc1 | 13 | 72420 | - | protein coding gene | ubiquitin interaction motif containing 1 | |
Tssr122674 | 13 | 15 | - | TSS region | transcription start site region 122674 | |
Gm6344 | 13 | 482 | + | pseudogene | predicted gene 6344 | |
Cpgi5656 | 13 | 1144 | CpG island | CpG island 5656 | ||
Tssr122675 | 13 | 26 | - | TSS region | transcription start site region 122675 | |
Tssr122676 | 13 | 73 | - | TSS region | transcription start site region 122676 | |
Cpgi5657 | 13 | 868 | CpG island | CpG island 5657 | ||
Tssr119912 | 13 | 11 | + | TSS region | transcription start site region 119912 | |
Tssr119913 | 13 | 50 | + | TSS region | transcription start site region 119913 | |
Zfp346 | 13 | 29514 | + | protein coding gene | zinc finger protein 346 | |
4432414F05Rik | 13 | 2545 | unclassified gene | RIKEN cDNA 4432414F05 gene | ||
A130082J08Rik | 13 | 1883 | unclassified gene | RIKEN cDNA A130082J08 gene | ||
Gm46415 | 13 | 344 | - | protein coding gene | predicted gene, 46415 | |
Gm17617 | 13 | 586 | - | protein coding gene | predicted gene, 17617 | |
Cpgi5658 | 13 | 999 | CpG island | CpG island 5658 | ||
Tssr119914 | 13 | 32 | + | TSS region | transcription start site region 119914 | |
Fgfr4 | 13 | 15941 | + | protein coding gene | fibroblast growth factor receptor 4 | |
Cpgi5659 | 13 | 515 | CpG island | CpG island 5659 | ||
Cpgi5660 | 13 | 504 | CpG island | CpG island 5660 | ||
Cpgi5661 | 13 | 194 | CpG island | CpG island 5661 | ||
Tssr122677 | 13 | 7 | - | TSS region | transcription start site region 122677 | |
3930401B19Rik | 13 | 1876 | unclassified gene | RIKEN cDNA 3930401B19 gene | ||
Cpgi5662 | 13 | 591 | CpG island | CpG island 5662 | ||
Tssr122678 | 13 | 50 | - | TSS region | transcription start site region 122678 | |
Tssr119915 | 13 | 23 | + | TSS region | transcription start site region 119915 | |
Tssr119916 | 13 | 15 | + | TSS region | transcription start site region 119916 | |
Cpgi5663 | 13 | 3295 | CpG island | CpG island 5663 | ||
Tssr119917 | 13 | 12 | + | TSS region | transcription start site region 119917 | |
Nsd1 | 13 | 108543 | + | protein coding gene | nuclear receptor-binding SET-domain protein 1 | |
Tssr119918 | 13 | 7 | + | TSS region | transcription start site region 119918 | |
Tssr119919 | 13 | 42 | + | TSS region | transcription start site region 119919 | |
Tssr119920 | 13 | 70 | + | TSS region | transcription start site region 119920 | |
Tssr119921 | 13 | 34 | + | TSS region | transcription start site region 119921 | |
Tssr122679 | 13 | 16 | - | TSS region | transcription start site region 122679 | |
Tssr119922 | 13 | 42 | + | TSS region | transcription start site region 119922 | |
Tssr122680 | 13 | 11 | - | TSS region | transcription start site region 122680 | |
Tssr122681 | 13 | 14 | - | TSS region | transcription start site region 122681 |