MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:53208672-53409751

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ror2	13	53109317 to 53286109	176792	-	protein coding gene	receptor tyrosine kinase-like orphan receptor 2
Cpgi5619	13	53285003 to 53286707	1704		CpG island	CpG island 5619
Tssr122577	13	53286052 to 53286129	77	-	TSS region	transcription start site region 122577
Tssr122578	13	53286195 to 53286213	18	-	TSS region	transcription start site region 122578
Gm33574	13	53286244 to 53294035	7791	+	lncRNA gene	predicted gene, 33574
Gm33631	13	53308672 to 53309751	1079	-	lncRNA gene	predicted gene, 33631
Sptlc1	13	53332748 to 53377397	44649	-	protein coding gene	serine palmitoyltransferase, long chain base subunit 1
Tssr122579	13	53369775 to 53369779	4	-	TSS region	transcription start site region 122579
Tssr122580	13	53370257 to 53370266	9	-	TSS region	transcription start site region 122580
Tssr122581	13	53373778 to 53373785	7	-	TSS region	transcription start site region 122581
Tssr122582	13	53374307 to 53374319	12	-	TSS region	transcription start site region 122582
Cpgi5620	13	53377045 to 53377579	534		CpG island	CpG island 5620
Tssr122583	13	53377355 to 53377373	18	-	TSS region	transcription start site region 122583
Tssr119832	13	53393589 to 53393678	89	+	TSS region	transcription start site region 119832
Tssr119833	13	53393682 to 53393694	12	+	TSS region	transcription start site region 119833
Gm2762	13	53393689 to 53455630	61941	+	lincRNA gene	predicted gene 2762
1700058M13Rik	13	53403949 to 53414829	10880		lncRNA gene	RIKEN cDNA 1700058M13 gene
Gm43262	13	53403950 to 53414830	10880	-	lincRNA gene	predicted gene 43262