Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Tesq1 | 13 | 35141362 | QTL | testis weight QTL 1 | ||
Ror2 | 13 | 176792 | - | protein coding gene | receptor tyrosine kinase-like orphan receptor 2 | |
Cpgi5618 | 13 | 244 | CpG island | CpG island 5618 | ||
Tssr122576 | 13 | 5 | - | TSS region | transcription start site region 122576 | |
Tssr119831 | 13 | 11 | + | TSS region | transcription start site region 119831 | |
C330026N13Rik | 13 | 1074 | unclassified non-coding RNA gene | RIKEN cDNA C330026N13 gene | ||
Cpgi5619 | 13 | 1704 | CpG island | CpG island 5619 | ||
Tssr122577 | 13 | 77 | - | TSS region | transcription start site region 122577 | |
Tssr122578 | 13 | 18 | - | TSS region | transcription start site region 122578 | |
Gm33574 | 13 | 7791 | + | lncRNA gene | predicted gene, 33574 | |
Gm33631 | 13 | 1079 | - | lncRNA gene | predicted gene, 33631 | |
Sptlc1 | 13 | 44649 | - | protein coding gene | serine palmitoyltransferase, long chain base subunit 1 | |
Tssr122579 | 13 | 4 | - | TSS region | transcription start site region 122579 | |
Tssr122580 | 13 | 9 | - | TSS region | transcription start site region 122580 | |
Tssr122581 | 13 | 7 | - | TSS region | transcription start site region 122581 | |
Tssr122582 | 13 | 12 | - | TSS region | transcription start site region 122582 | |
Cpgi5620 | 13 | 534 | CpG island | CpG island 5620 | ||
Tssr122583 | 13 | 18 | - | TSS region | transcription start site region 122583 | |
Tssr119832 | 13 | 89 | + | TSS region | transcription start site region 119832 | |
Tssr119833 | 13 | 12 | + | TSS region | transcription start site region 119833 | |
Gm2762 | 13 | 61941 | + | lincRNA gene | predicted gene 2762 | |
1700058M13Rik | 13 | 10880 | lncRNA gene | RIKEN cDNA 1700058M13 gene | ||
Gm43262 | 13 | 10880 | - | lincRNA gene | predicted gene 43262 | |
Tssr122584 | 13 | 11 | - | TSS region | transcription start site region 122584 | |
Gm38564 | 13 | 3402 | - | protein coding gene | predicted gene, 38564 | |
Tssr122585 | 13 | 18 | - | TSS region | transcription start site region 122585 | |
Tssr119834 | 13 | 5 | + | TSS region | transcription start site region 119834 | |
Tssr119835 | 13 | 6 | + | TSS region | transcription start site region 119835 | |
Gm33763 | 13 | 16927 | + | lncRNA gene | predicted gene, 33763 | |
Cpgi5621 | 13 | 886 | CpG island | CpG island 5621 | ||
Cpgi5622 | 13 | 541 | CpG island | CpG island 5622 | ||
Msx2 | 13 | 5899 | - | protein coding gene | msh homeobox 2 | |
Cpgi5623 | 13 | 1035 | CpG island | CpG island 5623 | ||
Tssr122586 | 13 | 13 | - | TSS region | transcription start site region 122586 | |
Tssr122587 | 13 | 52 | - | TSS region | transcription start site region 122587 | |
Tssr122588 | 13 | 10 | - | TSS region | transcription start site region 122588 | |
Tssr122589 | 13 | 28 | - | TSS region | transcription start site region 122589 | |
Cpgi5624 | 13 | 842 | CpG island | CpG island 5624 | ||
Gm40951 | 13 | 3622 | + | lncRNA gene | predicted gene, 40951 | |
Gm33873 | 13 | 23166 | + | lncRNA gene | predicted gene, 33873 | |
Gm40952 | 13 | 2529 | - | lncRNA gene | predicted gene, 40952 | |
Cpgi5625 | 13 | 399 | CpG island | CpG island 5625 | ||
Gm34022 | 13 | 28108 | - | lincRNA gene | predicted gene, 34022 | |
Gm5449 | 13 | 356 | + | pseudogene | predicted pseudogene 5449 | |
Tssr122590 | 13 | 47 | - | TSS region | transcription start site region 122590 | |
9530014B07Rik | 13 | 3299 | - | lincRNA gene | RIKEN cDNA 9530014B07 gene | |
Tssr122591 | 13 | 15 | - | TSS region | transcription start site region 122591 | |
Tssr122592 | 13 | 5 | - | TSS region | transcription start site region 122592 | |
Tssr122593 | 13 | 11 | - | TSS region | transcription start site region 122593 | |
Cpgi5626 | 13 | 228 | CpG island | CpG island 5626 | ||
4930555G21Rik | 13 | 1495 | + | lincRNA gene | RIKEN cDNA 4930555G21 gene | |
Cpgi5627 | 13 | 417 | CpG island | CpG island 5627 | ||
Gm34278 | 13 | 17918 | - | lincRNA gene | predicted gene, 34278 | |
Gm34332 | 13 | 1584 | + | lncRNA gene | predicted gene, 34332 | |
Gm34439 | 13 | 39333 | - | lncRNA gene | predicted gene, 34439 | |
Gm48548 | 13 | 2346 | + | lincRNA gene | predicted gene, 48548 | |
Cpgi5628 | 13 | 265 | CpG island | CpG island 5628 | ||
Gm40954 | 13 | 10807 | - | lncRNA gene | predicted gene, 40954 | |
Gm18974 | 13 | 583 | + | pseudogene | predicted gene, 18974 | |
E130119H09Rik | 13 | 3485 | - | unclassified non-coding RNA gene | RIKEN cDNA E130119H09 gene | |
Tssr122594 | 13 | 9 | - | TSS region | transcription start site region 122594 | |
Gm34557 | 13 | 2300 | - | lincRNA gene | predicted gene, 34557 | |
Gm48550 | 13 | 7722 | + | lincRNA gene | predicted gene, 48550 | |
Drd1 | 13 | 4475 | - | protein coding gene | dopamine receptor D1 | |
Cpgi5629 | 13 | 895 | CpG island | CpG island 5629 | ||
Tssr122595 | 13 | 30 | - | TSS region | transcription start site region 122595 | |
Tssr122596 | 13 | 30 | - | TSS region | transcription start site region 122596 | |
Cpgi5630 | 13 | 1058 | CpG island | CpG island 5630 | ||
Tssr119836 | 13 | 44 | + | TSS region | transcription start site region 119836 | |
Tssr119837 | 13 | 49 | + | TSS region | transcription start site region 119837 | |
Sfxn1 | 13 | 36473 | + | protein coding gene | sideroflexin 1 | |
Tssr122597 | 13 | 8 | - | TSS region | transcription start site region 122597 | |
Tssr119838 | 13 | 11 | + | TSS region | transcription start site region 119838 | |
Tssr122598 | 13 | 22 | - | TSS region | transcription start site region 122598 | |
Tssr119839 | 13 | 20 | + | TSS region | transcription start site region 119839 | |
Tssr119840 | 13 | 2 | + | TSS region | transcription start site region 119840 | |
Gm18473 | 13 | 865 | + | pseudogene | predicted gene, 18473 | |
Gm34640 | 13 | 3978 | - | lncRNA gene | predicted gene, 34640 | |
Tssr122599 | 13 | 32 | - | TSS region | transcription start site region 122599 | |
Tssr122600 | 13 | 14 | - | TSS region | transcription start site region 122600 | |
Tssr122601 | 13 | 15 | - | TSS region | transcription start site region 122601 | |
Cpgi5631 | 13 | 547 | CpG island | CpG island 5631 | ||
Tssr119841 | 13 | 45 | + | TSS region | transcription start site region 119841 | |
Hrh2 | 13 | 44051 | + | protein coding gene | histamine receptor H2 | |
Tssr119842 | 13 | 20 | + | TSS region | transcription start site region 119842 | |
Gm16578 | 13 | 3570 | - | antisense lncRNA gene | predicted gene 16578 | |
Tssr122602 | 13 | 11 | - | TSS region | transcription start site region 122602 | |
Gm48615 | 13 | 288 | + | lincRNA gene | predicted gene, 48615 | |
Cpgi5632 | 13 | 295 | CpG island | CpG island 5632 | ||
Gm40955 | 13 | 5836 | + | lncRNA gene | predicted gene, 40955 | |
Gm48623 | 13 | 10838 | + | lincRNA gene | predicted gene, 48623 | |
Cpgi5633 | 13 | 1184 | CpG island | CpG island 5633 | ||
Tssr119843 | 13 | 157 | + | TSS region | transcription start site region 119843 | |
Tssr119844 | 13 | 16 | + | TSS region | transcription start site region 119844 | |
Tssr122603 | 13 | 26 | - | TSS region | transcription start site region 122603 | |
Tssr119845 | 13 | 14 | + | TSS region | transcription start site region 119845 | |
Gm48622 | 13 | 17975 | - | lincRNA gene | predicted gene, 48622 | |
D13Mit297 | 13 | 130 | DNA segment | DNA Segment, Chr 13, Massachusetts Institute of Technology-297 | ||
Tssr119846 | 13 | 4 | + | TSS region | transcription start site region 119846 | |
Tssr119847 | 13 | 4 | + | TSS region | transcription start site region 119847 | |
Tssr119848 | 13 | 1 | + | TSS region | transcription start site region 119848 | |
Tssr119849 | 13 | 12 | + | TSS region | transcription start site region 119849 | |
Cpgi5634 | 13 | 741 | CpG island | CpG island 5634 | ||
Cplx2 | 13 | 12568 | + | protein coding gene | complexin 2 | |
Tssr119850 | 13 | 31 | + | TSS region | transcription start site region 119850 | |
Tssr119851 | 13 | 5 | + | TSS region | transcription start site region 119851 | |
Tssr119852 | 13 | 25 | + | TSS region | transcription start site region 119852 | |
Tssr119853 | 13 | 31 | + | TSS region | transcription start site region 119853 | |
Tssr119854 | 13 | 16 | + | TSS region | transcription start site region 119854 | |
Tssr119855 | 13 | 5 | + | TSS region | transcription start site region 119855 | |
Cpgi5635 | 13 | 288 | CpG island | CpG island 5635 | ||
Tssr119856 | 13 | 11 | + | TSS region | transcription start site region 119856 | |
Cpgi5636 | 13 | 516 | CpG island | CpG island 5636 | ||
Tssr122604 | 13 | 28 | - | TSS region | transcription start site region 122604 | |
Tssr122605 | 13 | 39 | - | TSS region | transcription start site region 122605 | |
Tssr119857 | 13 | 18 | + | TSS region | transcription start site region 119857 | |
Tssr119858 | 13 | 11 | + | TSS region | transcription start site region 119858 | |
Tssr122606 | 13 | 9 | - | TSS region | transcription start site region 122606 | |
Tssr119859 | 13 | 17 | + | TSS region | transcription start site region 119859 | |
Tssr119860 | 13 | 16 | + | TSS region | transcription start site region 119860 | |
Tssr119861 | 13 | 12 | + | TSS region | transcription start site region 119861 | |
Tssr119862 | 13 | 11 | + | TSS region | transcription start site region 119862 | |
Tssr119863 | 13 | 17 | + | TSS region | transcription start site region 119863 | |
Tssr119864 | 13 | 15 | + | TSS region | transcription start site region 119864 | |
Tssr119865 | 13 | 11 | + | TSS region | transcription start site region 119865 | |
Tssr119866 | 13 | 19 | + | TSS region | transcription start site region 119866 | |
Tssr119867 | 13 | 19 | + | TSS region | transcription start site region 119867 | |
Tssr119868 | 13 | 20 | + | TSS region | transcription start site region 119868 | |
Tssr119869 | 13 | 73 | + | TSS region | transcription start site region 119869 | |
Gm16248 | 13 | 242 | - | lincRNA gene | predicted gene 16248 | |
Tssr122607 | 13 | 5 | - | TSS region | transcription start site region 122607 | |
Tssr122608 | 13 | 22 | - | TSS region | transcription start site region 122608 | |
Gm22668 | 13 | 259 | - | unclassified non-coding RNA gene | predicted gene, 22668 | |
Thoc3 | 13 | 10003 | - | protein coding gene | THO complex 3 | |
Cpgi5637 | 13 | 760 | CpG island | CpG island 5637 | ||
Tssr122609 | 13 | 57 | - | TSS region | transcription start site region 122609 | |
D13Mit54 | 13 | 120 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 54 | ||
Cpgi5638 | 13 | 214 | CpG island | CpG island 5638 | ||
Gm2830 | 13 | 384 | - | pseudogene | predicted gene 2830 | |
Cpgi5639 | 13 | 1318 | CpG island | CpG island 5639 | ||
Tssr119870 | 13 | 7 | + | TSS region | transcription start site region 119870 | |
Del(13Simc1-B4galt7)2Dja | 13 | 1106664 | chromosomal deletion | deletion, Chr 13, David J Adams 2 | ||
Simc1 | 13 | 47511 | + | protein coding gene | SUMO-interacting motifs containing 1 | |
Tssr119871 | 13 | 14 | + | TSS region | transcription start site region 119871 | |
Tssr122610 | 13 | 17 | - | TSS region | transcription start site region 122610 | |
Tssr119872 | 13 | 4 | + | TSS region | transcription start site region 119872 | |
4833439L19Rik | 13 | 14164 | - | protein coding gene | RIKEN cDNA 4833439L19 gene | |
Tssr122611 | 13 | 32 | - | TSS region | transcription start site region 122611 | |
Cpgi5640 | 13 | 885 | CpG island | CpG island 5640 | ||
Tssr122612 | 13 | 63 | - | TSS region | transcription start site region 122612 | |
Tssr122613 | 13 | 18 | - | TSS region | transcription start site region 122613 | |
Tssr119873 | 13 | 49 | + | TSS region | transcription start site region 119873 | |
Cpgi5641 | 13 | 1031 | CpG island | CpG island 5641 | ||
Tssr119874 | 13 | 9 | + | TSS region | transcription start site region 119874 | |
Arl10 | 13 | 6113 | + | protein coding gene | ADP-ribosylation factor-like 10 | |
Tssr119875 | 13 | 73 | + | TSS region | transcription start site region 119875 | |
Tssr119876 | 13 | 16 | + | TSS region | transcription start site region 119876 | |
Gm24195 | 13 | 136 | + | miRNA gene | predicted gene, 24195 | |
Tssr119877 | 13 | 44 | + | TSS region | transcription start site region 119877 | |
Tssr119878 | 13 | 6 | + | TSS region | transcription start site region 119878 | |
Nop16 | 13 | 5883 | - | protein coding gene | NOP16 nucleolar protein | |
Tssr122614 | 13 | 5 | - | TSS region | transcription start site region 122614 | |
Cpgi5642 | 13 | 1461 | CpG island | CpG island 5642 | ||
Tssr119879 | 13 | 26 | + | TSS region | transcription start site region 119879 | |
Tssr122615 | 13 | 21 | - | TSS region | transcription start site region 122615 | |
Tssr122616 | 13 | 42 | - | TSS region | transcription start site region 122616 | |
Tssr119880 | 13 | 14 | + | TSS region | transcription start site region 119880 | |
Tssr119881 | 13 | 46 | + | TSS region | transcription start site region 119881 | |
Higd2a | 13 | 916 | + | protein coding gene | HIG1 domain family, member 2A | |
Tssr119882 | 13 | 16 | + | TSS region | transcription start site region 119882 | |
Cltb | 13 | 18466 | - | protein coding gene | clathrin, light polypeptide (Lcb) | |
Tssr122617 | 13 | 11 | - | TSS region | transcription start site region 122617 | |
Cpgi5643 | 13 | 493 | CpG island | CpG island 5643 | ||
Tssr122618 | 13 | 11 | - | TSS region | transcription start site region 122618 | |
Tssr122619 | 13 | 17 | - | TSS region | transcription start site region 122619 | |
Cpgi5644 | 13 | 1356 | CpG island | CpG island 5644 | ||
Tssr122620 | 13 | 23 | - | TSS region | transcription start site region 122620 | |
Tssr122621 | 13 | 17 | - | TSS region | transcription start site region 122621 | |
Tssr122622 | 13 | 55 | - | TSS region | transcription start site region 122622 | |
Tssr122623 | 13 | 13 | - | TSS region | transcription start site region 122623 | |
Cpgi5645 | 13 | 900 | CpG island | CpG island 5645 | ||
Tssr119883 | 13 | 13 | + | TSS region | transcription start site region 119883 | |
Faf2 | 13 | 42279 | + | protein coding gene | Fas associated factor family member 2 | |
Tssr119884 | 13 | 40 | + | TSS region | transcription start site region 119884 | |
Tssr119885 | 13 | 4 | + | TSS region | transcription start site region 119885 | |
D13Mit96 | 13 | 106 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 96 | ||
D13Mit96.1 | 13 | 208 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 96.1 | ||
Rn4.5s-ps3 | 13 | 93 | - | pseudogene | 4.5s RNA, pseudogene 3 | |
Rnf44 | 13 | 14508 | - | protein coding gene | ring finger protein 44 | |
Tssr122624 | 13 | 28 | - | TSS region | transcription start site region 122624 | |
Tssr122625 | 13 | 32 | - | TSS region | transcription start site region 122625 | |
Tssr122626 | 13 | 32 | - | TSS region | transcription start site region 122626 | |
Cpgi5646 | 13 | 1563 | CpG island | CpG island 5646 | ||
Tssr122627 | 13 | 16 | - | TSS region | transcription start site region 122627 | |
Tssr119886 | 13 | 14 | + | TSS region | transcription start site region 119886 | |
Tssr122628 | 13 | 20 | - | TSS region | transcription start site region 122628 | |
Tssr122629 | 13 | 44 | - | TSS region | transcription start site region 122629 | |
Tssr122630 | 13 | 113 | - | TSS region | transcription start site region 122630 | |
Tssr119887 | 13 | 15 | + | TSS region | transcription start site region 119887 | |
Tssr119888 | 13 | 22 | + | TSS region | transcription start site region 119888 |