Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:53059317-53336109

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ror2 13 53109317 to 53286109 176792 - protein coding gene receptor tyrosine kinase-like orphan receptor 2
Cpgi5615 13 53110234 to 53110615 381 CpG island CpG island 5615
Cpgi5616 13 53111021 to 53111564 543 CpG island CpG island 5616
Cpgi5617 13 53118654 to 53119113 459 CpG island CpG island 5617
Tssr122574 13 53146642 to 53146644 2 - TSS region transcription start site region 122574
Tssr4073 13 53161156 to 53161158 2 + TSS region transcription start site region 4073
Tssr122575 13 53163476 to 53163480 4 - TSS region transcription start site region 122575
Cpgi5618 13 53169125 to 53169369 244 CpG island CpG island 5618
Tssr122576 13 53184118 to 53184123 5 - TSS region transcription start site region 122576
Tssr119831 13 53184502 to 53184513 11 + TSS region transcription start site region 119831
C330026N13Rik 13 53185865 to 53186939 1074 unclassified non-coding RNA gene RIKEN cDNA C330026N13 gene
Cpgi5619 13 53285003 to 53286707 1704 CpG island CpG island 5619
Tssr122577 13 53286052 to 53286129 77 - TSS region transcription start site region 122577
Tssr122578 13 53286195 to 53286213 18 - TSS region transcription start site region 122578
Gm33574 13 53286244 to 53294035 7791 + lncRNA gene predicted gene, 33574
Gm33631 13 53308672 to 53309751 1079 - lncRNA gene predicted gene, 33631
Sptlc1 13 53332748 to 53377397 44649 - protein coding gene serine palmitoyltransferase, long chain base subunit 1