MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:52952897-53012927

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm40950	13	52954388 to 52967120	12732	+	lncRNA gene	predicted gene, 40950
n-R5s54	13	52964621 to 52964732	111	-	rRNA gene	nuclear encoded rRNA 5S 54
Nfil3	13	52967209 to 52981073	13864	-	protein coding gene	nuclear factor, interleukin 3, regulated
Tssr122567	13	52978159 to 52978169	10	-	TSS region	transcription start site region 122567
Cpgi5612	13	52978303 to 52978995	692		CpG island	CpG island 5612
Tssr122568	13	52979838 to 52979844	6	-	TSS region	transcription start site region 122568
Cpgi5613	13	52980014 to 52982198	2184		CpG island	CpG island 5613
Tssr122569	13	52981013 to 52981024	11	-	TSS region	transcription start site region 122569
Tssr122570	13	52981027 to 52981083	56	-	TSS region	transcription start site region 122570
Tssr119828	13	52981221 to 52981244	23	+	TSS region	transcription start site region 119828
Tssr122571	13	52981966 to 52981979	13	-	TSS region	transcription start site region 122571
Tssr122572	13	52982700 to 52982707	7	-	TSS region	transcription start site region 122572
Tssr122573	13	52982897 to 52982927	30	-	TSS region	transcription start site region 122573
Tssr119829	13	52985974 to 52985981	7	+	TSS region	transcription start site region 119829
D13Nds1	13	52990784 to 52990868	84		DNA segment	DNA segment, Chr 13, Nuffield Department of Surgery 1
Heal7	13	52990784 to 52990868	84		QTL	wound healing/regeneration 7
Tssr119830	13	53001861 to 53001870	9	+	TSS region	transcription start site region 119830
Gm33519	13	53008090 to 53018019	9929	-	lncRNA gene	predicted gene, 33519