Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:52607300-52897398

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syk 13 52583173 to 52648792 65619 + protein coding gene spleen tyrosine kinase
Tssr119806 13 52609358 to 52609373 15 + TSS region transcription start site region 119806
Tssr119807 13 52610723 to 52610734 11 + TSS region transcription start site region 119807
Tssr119808 13 52610897 to 52610916 19 + TSS region transcription start site region 119808
Tssr119809 13 52610930 to 52610957 27 + TSS region transcription start site region 119809
Tssr119810 13 52617375 to 52617385 10 + TSS region transcription start site region 119810
Tssr119811 13 52617396 to 52617403 7 + TSS region transcription start site region 119811
Tssr119812 13 52618192 to 52618208 16 + TSS region transcription start site region 119812
Tssr119813 13 52618663 to 52618682 19 + TSS region transcription start site region 119813
Tssr119814 13 52618711 to 52618756 45 + TSS region transcription start site region 119814
Tssr119815 13 52620935 to 52620947 12 + TSS region transcription start site region 119815
Tssr119816 13 52630037 to 52630054 17 + TSS region transcription start site region 119816
Tssr119817 13 52632957 to 52632986 29 + TSS region transcription start site region 119817
Tssr119818 13 52633327 to 52633337 10 + TSS region transcription start site region 119818
Tssr119819 13 52634279 to 52634297 18 + TSS region transcription start site region 119819
Tssr119820 13 52635959 to 52635970 11 + TSS region transcription start site region 119820
Tssr119821 13 52637151 to 52637161 10 + TSS region transcription start site region 119821
Cpgi5609 13 52638136 to 52638296 160 CpG island CpG island 5609
Tssr119822 13 52641148 to 52641156 8 + TSS region transcription start site region 119822
Tssr119823 13 52646534 to 52646547 13 + TSS region transcription start site region 119823
Tssr119824 13 52646919 to 52646950 31 + TSS region transcription start site region 119824
Tssr119825 13 52647007 to 52647018 11 + TSS region transcription start site region 119825
Tssr119826 13 52648108 to 52648128 20 + TSS region transcription start site region 119826
Tssr119827 13 52677318 to 52677320 2 + TSS region transcription start site region 119827
BB123696 13 52729615 to 52757205 27590 - lincRNA gene expressed sequence BB123696
Tssr122561 13 52735592 to 52735612 20 - TSS region transcription start site region 122561
D13Mit249 13 52752300 to 52752398 98 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 249
Cpgi5610 13 52793542 to 52793725 183 CpG island CpG island 5610
Tssr122562 13 52820243 to 52820255 12 - TSS region transcription start site region 122562
Gm33315 13 52828125 to 52845595 17470 + lncRNA gene predicted gene, 33315
Auh 13 52835119 to 52929681 94562 - protein coding gene AU RNA binding protein/enoyl-coenzyme A hydratase
Tssr122563 13 52843432 to 52843433 1 - TSS region transcription start site region 122563
D13Mit140 13 52872415 to 52872520 105 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 140