Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:52561919-52731950

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr122553 13 52561928 to 52561932 4 - TSS region transcription start site region 122553
Tssr122554 13 52568017 to 52568031 14 - TSS region transcription start site region 122554
Tssr122555 13 52568090 to 52568098 8 - TSS region transcription start site region 122555
Gm2848 13 52569880 to 52573225 3345 - lncRNA gene predicted gene 2848
Tssr122556 13 52572587 to 52572631 44 - TSS region transcription start site region 122556
Tssr122557 13 52573234 to 52573255 21 - TSS region transcription start site region 122557
Tssr119776 13 52582564 to 52582596 32 + TSS region transcription start site region 119776
Tssr119777 13 52582659 to 52582677 18 + TSS region transcription start site region 119777
Tssr119778 13 52582694 to 52582705 11 + TSS region transcription start site region 119778
Tssr119779 13 52582721 to 52582735 14 + TSS region transcription start site region 119779
Tssr119780 13 52582740 to 52582759 19 + TSS region transcription start site region 119780
Cpgi5608 13 52582744 to 52583706 962 CpG island CpG island 5608
Tssr119781 13 52582765 to 52582780 15 + TSS region transcription start site region 119781
Tssr119782 13 52582792 to 52582804 12 + TSS region transcription start site region 119782
Tssr119783 13 52582812 to 52582819 7 + TSS region transcription start site region 119783
Tssr119784 13 52583038 to 52583061 23 + TSS region transcription start site region 119784
Tssr119785 13 52583064 to 52583077 13 + TSS region transcription start site region 119785
Tssr119786 13 52583082 to 52583123 41 + TSS region transcription start site region 119786
Tssr119787 13 52583124 to 52583181 57 + TSS region transcription start site region 119787
Syk 13 52583173 to 52648792 65619 + protein coding gene spleen tyrosine kinase
Tssr119788 13 52583250 to 52583262 12 + TSS region transcription start site region 119788
Tssr119789 13 52583301 to 52583312 11 + TSS region transcription start site region 119789
Tssr119790 13 52583332 to 52583351 19 + TSS region transcription start site region 119790
Tssr119791 13 52583388 to 52583400 12 + TSS region transcription start site region 119791
Tssr119792 13 52583438 to 52583449 11 + TSS region transcription start site region 119792
Tssr119793 13 52583452 to 52583474 22 + TSS region transcription start site region 119793
Tssr119794 13 52583509 to 52583558 49 + TSS region transcription start site region 119794
Tssr122558 13 52584125 to 52584174 49 - TSS region transcription start site region 122558
Tssr119795 13 52585233 to 52585269 36 + TSS region transcription start site region 119795
Tssr119796 13 52585949 to 52585963 14 + TSS region transcription start site region 119796
Tssr122559 13 52587886 to 52587898 12 - TSS region transcription start site region 122559
Tssr119797 13 52588197 to 52588209 12 + TSS region transcription start site region 119797
Tssr119798 13 52591832 to 52591836 4 + TSS region transcription start site region 119798
Tssr119799 13 52596847 to 52596858 11 + TSS region transcription start site region 119799
Tssr119800 13 52596861 to 52596911 50 + TSS region transcription start site region 119800
Tssr119801 13 52596920 to 52596939 19 + TSS region transcription start site region 119801
Tssr119802 13 52596954 to 52596965 11 + TSS region transcription start site region 119802
Tssr122560 13 52600226 to 52600244 18 - TSS region transcription start site region 122560
Tssr119803 13 52606914 to 52606933 19 + TSS region transcription start site region 119803
Tssr119804 13 52607215 to 52607233 18 + TSS region transcription start site region 119804
Tssr119805 13 52607268 to 52607291 23 + TSS region transcription start site region 119805
Tssr119806 13 52609358 to 52609373 15 + TSS region transcription start site region 119806
Tssr119807 13 52610723 to 52610734 11 + TSS region transcription start site region 119807
Tssr119808 13 52610897 to 52610916 19 + TSS region transcription start site region 119808
Tssr119809 13 52610930 to 52610957 27 + TSS region transcription start site region 119809
Tssr119810 13 52617375 to 52617385 10 + TSS region transcription start site region 119810
Tssr119811 13 52617396 to 52617403 7 + TSS region transcription start site region 119811
Tssr119812 13 52618192 to 52618208 16 + TSS region transcription start site region 119812
Tssr119813 13 52618663 to 52618682 19 + TSS region transcription start site region 119813
Tssr119814 13 52618711 to 52618756 45 + TSS region transcription start site region 119814
Tssr119815 13 52620935 to 52620947 12 + TSS region transcription start site region 119815
Tssr119816 13 52630037 to 52630054 17 + TSS region transcription start site region 119816
Tssr119817 13 52632957 to 52632986 29 + TSS region transcription start site region 119817
Tssr119818 13 52633327 to 52633337 10 + TSS region transcription start site region 119818
Tssr119819 13 52634279 to 52634297 18 + TSS region transcription start site region 119819
Tssr119820 13 52635959 to 52635970 11 + TSS region transcription start site region 119820
Tssr119821 13 52637151 to 52637161 10 + TSS region transcription start site region 119821
Cpgi5609 13 52638136 to 52638296 160 CpG island CpG island 5609
Tssr119822 13 52641148 to 52641156 8 + TSS region transcription start site region 119822
Tssr119823 13 52646534 to 52646547 13 + TSS region transcription start site region 119823
Tssr119824 13 52646919 to 52646950 31 + TSS region transcription start site region 119824
Tssr119825 13 52647007 to 52647018 11 + TSS region transcription start site region 119825
Tssr119826 13 52648108 to 52648128 20 + TSS region transcription start site region 119826
Tssr119827 13 52677318 to 52677320 2 + TSS region transcription start site region 119827
BB123696 13 52729615 to 52757205 27590 - lincRNA gene expressed sequence BB123696