Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:51809590-52549592

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5603 13 51832270 to 51832461 191 CpG island CpG island 5603
Tssr4069 13 51833576 to 51833577 1 + TSS region transcription start site region 4069
Tssr119771 13 51837807 to 51837814 7 + TSS region transcription start site region 119771
Tssr4070 13 51838510 to 51838519 9 + TSS region transcription start site region 4070
Tssr4071 13 51843849 to 51843860 11 - TSS region transcription start site region 4071
Cpgi5604 13 51845290 to 51846225 935 CpG island CpG island 5604
Tssr122545 13 51846284 to 51846288 4 - TSS region transcription start site region 122545
Cpgi5605 13 51846457 to 51848446 1989 CpG island CpG island 5605
Tssr119772 13 51846673 to 51846683 10 + TSS region transcription start site region 119772
Gadd45g 13 51846678 to 51848468 1790 + protein coding gene growth arrest and DNA-damage-inducible 45 gamma
Tssr122546 13 51848289 to 51848319 30 - TSS region transcription start site region 122546
D13Mit183 13 51858105 to 51858240 135 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 183
Gm26651 13 51973214 to 51976583 3369 + lincRNA gene predicted gene, 26651
Gm37872 13 52019774 to 52021927 2153 - unclassified gene predicted gene, 37872
Gm40948 13 52082639 to 52083607 968 - lncRNA gene predicted gene, 40948
Gm48190 13 52087607 to 52096668 9061 - lincRNA gene predicted gene, 48190
Tssr119773 13 52096712 to 52096718 6 + TSS region transcription start site region 119773
Tssr119774 13 52096725 to 52096747 22 + TSS region transcription start site region 119774
4921525O09Rik 13 52096741 to 52124158 27417 + lncRNA gene RIKEN cDNA 4921525O09 gene
Tssr4072 13 52179590 to 52179592 2 + TSS region transcription start site region 4072
Tssr119775 13 52180261 to 52180266 5 + TSS region transcription start site region 119775
Gm48199 13 52180411 to 52181637 1226 + lincRNA gene predicted gene, 48199
Gm33041 13 52222868 to 52227977 5109 + lncRNA gene predicted gene, 33041
Gm33116 13 52233830 to 52245034 11204 + lncRNA gene predicted gene, 33116
Diras2 13 52504375 to 52531241 26866 - protein coding gene DIRAS family, GTP-binding RAS-like 2
Cpgi5606 13 52507566 to 52508254 688 CpG island CpG island 5606
Tssr122547 13 52507630 to 52507640 10 - TSS region transcription start site region 122547
Cpgi5607 13 52530202 to 52530899 697 CpG island CpG island 5607
Tssr122548 13 52530457 to 52530522 65 - TSS region transcription start site region 122548
Tssr122549 13 52530671 to 52530684 13 - TSS region transcription start site region 122549
Tssr122550 13 52530689 to 52530807 118 - TSS region transcription start site region 122550
Tssr122551 13 52530827 to 52530841 14 - TSS region transcription start site region 122551
Tssr122552 13 52531269 to 52531285 16 - TSS region transcription start site region 122552