Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:51331041-51667084

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46414 13 51208641 to 51372636 163995 + lncRNA gene predicted gene, 46414
Gm6056 13 51338921 to 51339707 786 + pseudogene predicted gene 6056
Gm47554 13 51344996 to 51345598 602 + pseudogene predicted gene, 47554
Gm32834 13 51378153 to 51418686 40533 - lincRNA gene predicted gene, 32834
D13Mit156.1 13 51395069 to 51395242 173 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 156.1
D13Mit156 13 51395203 to 51395331 128 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 156
Cpgi5594 13 51408488 to 51409079 591 CpG island CpG island 5594
S1pr3 13 51408639 to 51422797 14158 + protein coding gene sphingosine-1-phosphate receptor 3
Tssr119757 13 51408756 to 51408781 25 + TSS region transcription start site region 119757
Cpgi5595 13 51419394 to 51419581 187 CpG island CpG island 5595
Shc3 13 51431041 to 51567084 136043 - protein coding gene src homology 2 domain-containing transforming protein C3
D13Mit247 13 51476607 to 51476720 113 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 247
Cpgi5596 13 51566556 to 51567912 1356 CpG island CpG island 5596
Tssr122504 13 51567750 to 51567773 23 - TSS region transcription start site region 122504
Tssr122505 13 51567780 to 51567836 56 - TSS region transcription start site region 122505
Tssr122506 13 51568052 to 51568094 42 - TSS region transcription start site region 122506
Tssr122507 13 51568301 to 51568333 32 - TSS region transcription start site region 122507
Cpgi5597 13 51568728 to 51569331 603 CpG island CpG island 5597
Tssr122508 13 51569076 to 51569116 40 - TSS region transcription start site region 122508
Tssr122509 13 51569171 to 51569192 21 - TSS region transcription start site region 122509
Tssr122510 13 51569341 to 51569345 4 - TSS region transcription start site region 122510
Tssr122511 13 51569437 to 51569467 30 - TSS region transcription start site region 122511
Cpgi5598 13 51594793 to 51595323 530 CpG island CpG island 5598
Tssr119758 13 51642682 to 51642690 8 + TSS region transcription start site region 119758
Cpgi5599 13 51644787 to 51645842 1055 CpG island CpG island 5599
Tssr122512 13 51644894 to 51644899 5 - TSS region transcription start site region 122512
Cks2 13 51645232 to 51650660 5428 + protein coding gene CDC28 protein kinase regulatory subunit 2
Tssr119759 13 51645268 to 51645276 8 + TSS region transcription start site region 119759
Tssr119760 13 51645284 to 51645299 15 + TSS region transcription start site region 119760
Tssr119761 13 51645310 to 51645332 22 + TSS region transcription start site region 119761
Tssr119762 13 51645370 to 51645392 22 + TSS region transcription start site region 119762
Tssr119763 13 51645692 to 51645727 35 + TSS region transcription start site region 119763
Tssr119764 13 51645736 to 51645747 11 + TSS region transcription start site region 119764
Gm22806 13 51648199 to 51648334 135 + snoRNA gene predicted gene, 22806
Cpgi5600 13 51651198 to 51652137 939 CpG island CpG island 5600
Tssr119765 13 51651573 to 51651582 9 + TSS region transcription start site region 119765
Tssr119766 13 51651691 to 51651702 11 + TSS region transcription start site region 119766
Secisbp2 13 51651697 to 51684044 32347 + protein coding gene SECIS binding protein 2
Tssr119767 13 51651709 to 51651746 37 + TSS region transcription start site region 119767
Tssr119768 13 51651761 to 51651777 16 + TSS region transcription start site region 119768