MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:50322609-50522616

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm46385	13	50300899 to 50342216	41317	-	pseudogene	predicted gene, 46385
Gm8739	13	50343611 to 50344161	550	-	antisense lncRNA gene	predicted gene 8739
Gm19536	13	50399335 to 50400423	1088	-	protein coding gene	predicted gene, 19536
Gm8742	13	50412062 to 50414576	2514	-	pseudogene	predicted gene 8742
Cpgi5589	13	50417714 to 50418214	500		CpG island	CpG island 5589
Tssr119740	13	50417856 to 50417872	16	+	TSS region	transcription start site region 119740
Fbxw17	13	50417864 to 50433780	15916	+	protein coding gene	F-box and WD-40 domain protein 17
Tssr119741	13	50417874 to 50417912	38	+	TSS region	transcription start site region 119741
Tssr119742	13	50417925 to 50417932	7	+	TSS region	transcription start site region 119742
Tssr119743	13	50422609 to 50422616	7	+	TSS region	transcription start site region 119743
Gm47429	13	50443408 to 50443912	504	-	protein coding gene	predicted gene, 47429
Tssr122494	13	50443850 to 50443860	10	-	TSS region	transcription start site region 122494
Tssr122495	13	50443867 to 50443894	27	-	TSS region	transcription start site region 122495
Tssr122496	13	50443910 to 50443914	4	-	TSS region	transcription start site region 122496
Gm40946	13	50448942 to 50465268	16326	-	lncRNA gene	predicted gene, 40946
Cpgi5590	13	50464843 to 50465103	260		CpG island	CpG island 5590
Nutm2	13	50467307 to 50475355	8048	+	protein coding gene	NUT family member 2
Gm7259	13	50490585 to 50491435	850	+	pseudogene	predicted gene 7259
Gm31835	13	50516647 to 50539528	22881	-	lncRNA gene	predicted gene, 31835