Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:49544400-49764418

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cenpp 13 49464023 to 49652785 188762 - protein coding gene centromere protein P
Aspn 13 49544443 to 49567565 23122 + protein coding gene asporin
Tssr119711 13 49544479 to 49544533 54 + TSS region transcription start site region 119711
Tssr119712 13 49544625 to 49544636 11 + TSS region transcription start site region 119712
Tssr119713 13 49548580 to 49548601 21 + TSS region transcription start site region 119713
Omd 13 49582462 to 49592822 10360 + protein coding gene osteomodulin
Tssr119714 13 49582541 to 49582578 37 + TSS region transcription start site region 119714
Tssr119715 13 49582623 to 49582643 20 + TSS region transcription start site region 119715
Tssr119716 13 49582668 to 49582707 39 + TSS region transcription start site region 119716
Tssr119717 13 49582708 to 49582734 26 + TSS region transcription start site region 119717
Tssr119718 13 49582745 to 49582778 33 + TSS region transcription start site region 119718
Tssr122488 13 49593960 to 49593965 5 - TSS region transcription start site region 122488
Tssr119719 13 49608005 to 49608024 19 + TSS region transcription start site region 119719
Tssr119720 13 49608030 to 49608063 33 + TSS region transcription start site region 119720
Ogn 13 49608071 to 49624500 16429 + protein coding gene osteoglycin
Tssr119721 13 49609033 to 49609044 11 + TSS region transcription start site region 119721
Tssr119722 13 49609055 to 49609096 41 + TSS region transcription start site region 119722
Tssr119723 13 49609099 to 49609113 14 + TSS region transcription start site region 119723
Tssr119724 13 49609127 to 49609170 43 + TSS region transcription start site region 119724
Tssr119725 13 49622901 to 49622913 12 + TSS region transcription start site region 119725
Tssr119726 13 49622966 to 49622979 13 + TSS region transcription start site region 119726
Tssr119727 13 49623529 to 49623534 5 + TSS region transcription start site region 119727
D13Mit182 13 49627899 to 49628048 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 182
Cpgi5586 13 49652405 to 49653565 1160 CpG island CpG island 5586
Tssr122489 13 49652714 to 49652754 40 - TSS region transcription start site region 122489
Tssr122490 13 49652756 to 49652781 25 - TSS region transcription start site region 122490
Tssr122491 13 49652889 to 49652914 25 - TSS region transcription start site region 122491
Tssr119728 13 49653067 to 49653097 30 + TSS region transcription start site region 119728
Nol8 13 49653078 to 49679016 25938 + protein coding gene nucleolar protein 8
Tssr119729 13 49653098 to 49653136 38 + TSS region transcription start site region 119729
Tssr119730 13 49653297 to 49653367 70 + TSS region transcription start site region 119730
Tssr119731 13 49654400 to 49654418 18 + TSS region transcription start site region 119731
Cpgi5587 13 49681901 to 49682520 619 CpG island CpG island 5587
Tssr119732 13 49682118 to 49682169 51 + TSS region transcription start site region 119732
Iars 13 49682130 to 49734267 52137 + protein coding gene isoleucine-tRNA synthetase
Tssr119733 13 49682210 to 49682221 11 + TSS region transcription start site region 119733
Gm25394 13 49684301 to 49684433 132 + snoRNA gene predicted gene, 25394
Gm23482 13 49714119 to 49714240 121 + snoRNA gene predicted gene, 23482
Tssr119734 13 49731473 to 49731492 19 + TSS region transcription start site region 119734
Tssr119735 13 49732444 to 49732464 20 + TSS region transcription start site region 119735
Gm19334 13 49750462 to 49752536 2074 + protein coding gene predicted gene, 19334
Cpgi5588 13 49762431 to 49762684 253 CpG island CpG island 5588
Tssr119736 13 49762472 to 49762487 15 + TSS region transcription start site region 119736
Gm270 13 49764328 to 49765303 975 + protein coding gene predicted gene 270