Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:49364774-49644816

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bicd2 13 49341585 to 49387026 45441 + protein coding gene BICD cargo adaptor 2
Gm46413 13 49391565 to 49407347 15782 - lncRNA gene predicted gene, 46413
Cpgi5585 13 49420626 to 49421999 1373 CpG island CpG island 5585
Ippk 13 49421190 to 49463060 41870 + protein coding gene inositol 1,3,4,5,6-pentakisphosphate 2-kinase
Tssr119704 13 49421229 to 49421303 74 + TSS region transcription start site region 119704
Cenpp 13 49464023 to 49652785 188762 - protein coding gene centromere protein P
Tssr119705 13 49493595 to 49493606 11 + TSS region transcription start site region 119705
Tssr119706 13 49493621 to 49493643 22 + TSS region transcription start site region 119706
Tes3-ps 13 49493652 to 49496389 2737 + pseudogene testis derived transcript 3, pseudogene
Tssr119707 13 49504774 to 49504816 42 + TSS region transcription start site region 119707
Ecm2 13 49504810 to 49532789 27979 + protein coding gene extracellular matrix protein 2, female organ and adipocyte specific
Tssr119708 13 49504852 to 49504880 28 + TSS region transcription start site region 119708
Tssr119709 13 49504885 to 49504910 25 + TSS region transcription start site region 119709
Tssr119710 13 49504943 to 49504958 15 + TSS region transcription start site region 119710
Aspn 13 49544443 to 49567565 23122 + protein coding gene asporin
Tssr119711 13 49544479 to 49544533 54 + TSS region transcription start site region 119711
Tssr119712 13 49544625 to 49544636 11 + TSS region transcription start site region 119712
Tssr119713 13 49548580 to 49548601 21 + TSS region transcription start site region 119713
Omd 13 49582462 to 49592822 10360 + protein coding gene osteomodulin
Tssr119714 13 49582541 to 49582578 37 + TSS region transcription start site region 119714
Tssr119715 13 49582623 to 49582643 20 + TSS region transcription start site region 119715
Tssr119716 13 49582668 to 49582707 39 + TSS region transcription start site region 119716
Tssr119717 13 49582708 to 49582734 26 + TSS region transcription start site region 119717
Tssr119718 13 49582745 to 49582778 33 + TSS region transcription start site region 119718
Tssr122488 13 49593960 to 49593965 5 - TSS region transcription start site region 122488
Tssr119719 13 49608005 to 49608024 19 + TSS region transcription start site region 119719
Tssr119720 13 49608030 to 49608063 33 + TSS region transcription start site region 119720
Ogn 13 49608071 to 49624500 16429 + protein coding gene osteoglycin
Tssr119721 13 49609033 to 49609044 11 + TSS region transcription start site region 119721
Tssr119722 13 49609055 to 49609096 41 + TSS region transcription start site region 119722
Tssr119723 13 49609099 to 49609113 14 + TSS region transcription start site region 119723
Tssr119724 13 49609127 to 49609170 43 + TSS region transcription start site region 119724
Tssr119725 13 49622901 to 49622913 12 + TSS region transcription start site region 119725
Tssr119726 13 49622966 to 49622979 13 + TSS region transcription start site region 119726
Tssr119727 13 49623529 to 49623534 5 + TSS region transcription start site region 119727
D13Mit182 13 49627899 to 49628048 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 182