Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:48996303-49188014

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit268 13 49002994 to 49003134 140 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 268
Tssr119677 13 49013753 to 49013765 12 + TSS region transcription start site region 119677
Tssr122431 13 49014583 to 49014623 40 - TSS region transcription start site region 122431
Tssr122432 13 49015283 to 49015292 9 - TSS region transcription start site region 122432
Tssr122433 13 49015477 to 49015497 20 - TSS region transcription start site region 122433
Cpgi5578 13 49016180 to 49016554 374 CpG island CpG island 5578
Wnk2 13 49036303 to 49148014 111711 - protein coding gene WNK lysine deficient protein kinase 2
Tssr122434 13 49043918 to 49043927 9 - TSS region transcription start site region 122434
Tssr122435 13 49062439 to 49062443 4 - TSS region transcription start site region 122435
Tssr122436 13 49127869 to 49127883 14 - TSS region transcription start site region 122436
Cpgi5579 13 49146247 to 49148515 2268 CpG island CpG island 5579
Tssr122437 13 49147666 to 49147684 18 - TSS region transcription start site region 122437
Tssr122438 13 49147931 to 49148037 106 - TSS region transcription start site region 122438
D13Mit93 13 49158030 to 49158163 133 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 93
Gm40942 13 49161905 to 49163639 1734 - lncRNA gene predicted gene, 40942
Tssr122439 13 49168273 to 49168316 43 - TSS region transcription start site region 122439
Gm40943 13 49169808 to 49183825 14017 - lncRNA gene predicted gene, 40943
Tssr122440 13 49183719 to 49183732 13 - TSS region transcription start site region 122440
Tssr122441 13 49183789 to 49183800 11 - TSS region transcription start site region 122441
Tssr122442 13 49183848 to 49183857 9 - TSS region transcription start site region 122442
Tssr122443 13 49183928 to 49183957 29 - TSS region transcription start site region 122443
Tssr122444 13 49183968 to 49183975 7 - TSS region transcription start site region 122444
Cpgi5580 13 49186819 to 49188351 1532 CpG island CpG island 5580
Tssr119678 13 49187485 to 49187539 54 + TSS region transcription start site region 119678
Ninj1 13 49187547 to 49196251 8704 + protein coding gene ninjurin 1
Tssr122445 13 49187913 to 49187924 11 - TSS region transcription start site region 122445
Tssr122446 13 49187938 to 49187952 14 - TSS region transcription start site region 122446
Tssr122447 13 49187953 to 49187961 8 - TSS region transcription start site region 122447
Tssr122448 13 49187997 to 49188011 14 - TSS region transcription start site region 122448
Tssr122449 13 49188013 to 49188029 16 - TSS region transcription start site region 122449