Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:48971303-49213014

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18312 13 48978708 to 48981240 2532 - pseudogene predicted gene, 18312
D13Mit268 13 49002994 to 49003134 140 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 268
Tssr119677 13 49013753 to 49013765 12 + TSS region transcription start site region 119677
Tssr122431 13 49014583 to 49014623 40 - TSS region transcription start site region 122431
Tssr122432 13 49015283 to 49015292 9 - TSS region transcription start site region 122432
Tssr122433 13 49015477 to 49015497 20 - TSS region transcription start site region 122433
Cpgi5578 13 49016180 to 49016554 374 CpG island CpG island 5578
Wnk2 13 49036303 to 49148014 111711 - protein coding gene WNK lysine deficient protein kinase 2
Tssr122434 13 49043918 to 49043927 9 - TSS region transcription start site region 122434
Tssr122435 13 49062439 to 49062443 4 - TSS region transcription start site region 122435
Tssr122436 13 49127869 to 49127883 14 - TSS region transcription start site region 122436
Cpgi5579 13 49146247 to 49148515 2268 CpG island CpG island 5579
Tssr122437 13 49147666 to 49147684 18 - TSS region transcription start site region 122437
Tssr122438 13 49147931 to 49148037 106 - TSS region transcription start site region 122438
D13Mit93 13 49158030 to 49158163 133 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 93
Gm40942 13 49161905 to 49163639 1734 - lncRNA gene predicted gene, 40942
Tssr122439 13 49168273 to 49168316 43 - TSS region transcription start site region 122439
Gm40943 13 49169808 to 49183825 14017 - lncRNA gene predicted gene, 40943
Tssr122440 13 49183719 to 49183732 13 - TSS region transcription start site region 122440
Tssr122441 13 49183789 to 49183800 11 - TSS region transcription start site region 122441
Tssr122442 13 49183848 to 49183857 9 - TSS region transcription start site region 122442
Tssr122443 13 49183928 to 49183957 29 - TSS region transcription start site region 122443
Tssr122444 13 49183968 to 49183975 7 - TSS region transcription start site region 122444
Cpgi5580 13 49186819 to 49188351 1532 CpG island CpG island 5580
Tssr119678 13 49187485 to 49187539 54 + TSS region transcription start site region 119678
Ninj1 13 49187547 to 49196251 8704 + protein coding gene ninjurin 1
Tssr122445 13 49187913 to 49187924 11 - TSS region transcription start site region 122445
Tssr122446 13 49187938 to 49187952 14 - TSS region transcription start site region 122446
Tssr122447 13 49187953 to 49187961 8 - TSS region transcription start site region 122447
Tssr122448 13 49187997 to 49188011 14 - TSS region transcription start site region 122448
Tssr122449 13 49188013 to 49188029 16 - TSS region transcription start site region 122449
Tssr119679 13 49188156 to 49188167 11 + TSS region transcription start site region 119679
Tssr119680 13 49188202 to 49188216 14 + TSS region transcription start site region 119680
Tssr119681 13 49188245 to 49188261 16 + TSS region transcription start site region 119681
Tssr119682 13 49188508 to 49188558 50 + TSS region transcription start site region 119682
Tssr122450 13 49190151 to 49190167 16 - TSS region transcription start site region 122450
Tssr122451 13 49190198 to 49190208 10 - TSS region transcription start site region 122451
Tssr119683 13 49190329 to 49190331 2 + TSS region transcription start site region 119683
Tssr119684 13 49190352 to 49190358 6 + TSS region transcription start site region 119684
Tssr122452 13 49190793 to 49190803 10 - TSS region transcription start site region 122452
Tssr119685 13 49190953 to 49190959 6 + TSS region transcription start site region 119685
Tssr119686 13 49191071 to 49191084 13 + TSS region transcription start site region 119686
Tssr122453 13 49191694 to 49191718 24 - TSS region transcription start site region 122453
Tssr119687 13 49193725 to 49193760 35 + TSS region transcription start site region 119687
Tssr119688 13 49193861 to 49193917 56 + TSS region transcription start site region 119688
Tssr119689 13 49195684 to 49195699 15 + TSS region transcription start site region 119689
Tssr119690 13 49195710 to 49195738 28 + TSS region transcription start site region 119690
Tssr119691 13 49195928 to 49195953 25 + TSS region transcription start site region 119691
Tssr122454 13 49195969 to 49195988 19 - TSS region transcription start site region 122454
Tssr122455 13 49195992 to 49196007 15 - TSS region transcription start site region 122455
Tssr119692 13 49197027 to 49197033 6 + TSS region transcription start site region 119692
Tssr119693 13 49197059 to 49197068 9 + TSS region transcription start site region 119693
Tssr122456 13 49200526 to 49200531 5 - TSS region transcription start site region 122456
Tssr122457 13 49200595 to 49200608 13 - TSS region transcription start site region 122457
Tssr122458 13 49200719 to 49200736 17 - TSS region transcription start site region 122458
Card19 13 49202950 to 49216037 13087 - protein coding gene caspase recruitment domain family, member 19
Tssr122459 13 49204066 to 49204109 43 - TSS region transcription start site region 122459
Tssr122460 13 49205428 to 49205442 14 - TSS region transcription start site region 122460
Tssr122461 13 49205457 to 49205483 26 - TSS region transcription start site region 122461
Tssr122462 13 49205507 to 49205519 12 - TSS region transcription start site region 122462
Tssr122463 13 49208039 to 49208053 14 - TSS region transcription start site region 122463
Tssr122464 13 49208055 to 49208069 14 - TSS region transcription start site region 122464
Tssr122465 13 49210285 to 49210310 25 - TSS region transcription start site region 122465
Tssr122466 13 49212361 to 49212373 12 - TSS region transcription start site region 122466