Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:48947439-49177443

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam120a 13 48879216 to 48967877 88661 - protein coding gene family with sequence similarity 120, member A
Tssr122421 13 48949141 to 48949157 16 - TSS region transcription start site region 122421
Cpgi5577 13 48966892 to 48968857 1965 CpG island CpG island 5577
Tssr122422 13 48968004 to 48968029 25 - TSS region transcription start site region 122422
Tssr122423 13 48968034 to 48968068 34 - TSS region transcription start site region 122423
Tssr122424 13 48968077 to 48968082 5 - TSS region transcription start site region 122424
Fam120aos 13 48968112 to 48969905 1793 + lincRNA gene family with sequence similarity 120A, opposite strand
Tssr122425 13 48968115 to 48968124 9 - TSS region transcription start site region 122425
Tssr119671 13 48968161 to 48968216 55 + TSS region transcription start site region 119671
Tssr122426 13 48968209 to 48968220 11 - TSS region transcription start site region 122426
Tssr4062 13 48968236 to 48968251 15 - TSS region transcription start site region 4062
Tssr4063 13 48968276 to 48968286 10 - TSS region transcription start site region 4063
Tssr119672 13 48968324 to 48968355 31 + TSS region transcription start site region 119672
Tssr119673 13 48968367 to 48968430 63 + TSS region transcription start site region 119673
Tssr122427 13 48968421 to 48968466 45 - TSS region transcription start site region 122427
Tssr122428 13 48968478 to 48968489 11 - TSS region transcription start site region 122428
Tssr122429 13 48968756 to 48968759 3 - TSS region transcription start site region 122429
Tssr119674 13 48968900 to 48968904 4 + TSS region transcription start site region 119674
Tssr119675 13 48969011 to 48969023 12 + TSS region transcription start site region 119675
Tssr119676 13 48969088 to 48969111 23 + TSS region transcription start site region 119676
Tssr122430 13 48971202 to 48971205 3 - TSS region transcription start site region 122430
Gm18312 13 48978708 to 48981240 2532 - pseudogene predicted gene, 18312
D13Mit268 13 49002994 to 49003134 140 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 268
Tssr119677 13 49013753 to 49013765 12 + TSS region transcription start site region 119677
Tssr122431 13 49014583 to 49014623 40 - TSS region transcription start site region 122431
Tssr122432 13 49015283 to 49015292 9 - TSS region transcription start site region 122432
Tssr122433 13 49015477 to 49015497 20 - TSS region transcription start site region 122433
Cpgi5578 13 49016180 to 49016554 374 CpG island CpG island 5578
Wnk2 13 49036303 to 49148014 111711 - protein coding gene WNK lysine deficient protein kinase 2
Tssr122434 13 49043918 to 49043927 9 - TSS region transcription start site region 122434
Tssr122435 13 49062439 to 49062443 4 - TSS region transcription start site region 122435
Tssr122436 13 49127869 to 49127883 14 - TSS region transcription start site region 122436
Cpgi5579 13 49146247 to 49148515 2268 CpG island CpG island 5579
Tssr122437 13 49147666 to 49147684 18 - TSS region transcription start site region 122437
Tssr122438 13 49147931 to 49148037 106 - TSS region transcription start site region 122438
D13Mit93 13 49158030 to 49158163 133 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 93
Gm40942 13 49161905 to 49163639 1734 - lncRNA gene predicted gene, 40942
Tssr122439 13 49168273 to 49168316 43 - TSS region transcription start site region 122439
Gm40943 13 49169808 to 49183825 14017 - lncRNA gene predicted gene, 40943